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Calcium in PDB 5ere: Extracellular Ligand Binding Receptor From Desulfohalobium Retbaense DSM5692

Protein crystallography data

The structure of Extracellular Ligand Binding Receptor From Desulfohalobium Retbaense DSM5692, PDB code: 5ere was solved by M.Cuff, R.Wu, M.Endres, P.R.Pokkuluri, A.Joachimiak, Midwest Center Forstructural Genomics (Mcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 33.19 / 2.00
Space group P 41 21 2
Cell size a, b, c (Å), α, β, γ (°) 104.946, 104.946, 140.181, 90.00, 90.00, 90.00
R / Rfree (%) 17.2 / 22.6

Calcium Binding Sites:

The binding sites of Calcium atom in the Extracellular Ligand Binding Receptor From Desulfohalobium Retbaense DSM5692 (pdb code 5ere). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Extracellular Ligand Binding Receptor From Desulfohalobium Retbaense DSM5692, PDB code: 5ere:

Calcium binding site 1 out of 1 in 5ere

Go back to Calcium Binding Sites List in 5ere
Calcium binding site 1 out of 1 in the Extracellular Ligand Binding Receptor From Desulfohalobium Retbaense DSM5692


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Extracellular Ligand Binding Receptor From Desulfohalobium Retbaense DSM5692 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca604

b:38.4
occ:1.00
O A:GLU313 2.3 33.9 1.0
OD1 A:ASN318 2.3 36.4 1.0
OE2 A:GLU313 2.4 45.7 1.0
O A:ALA316 2.4 37.7 1.0
CD A:GLU313 3.4 41.3 1.0
C A:GLU313 3.5 34.5 1.0
CG A:ASN318 3.5 39.1 1.0
C A:ALA316 3.6 43.0 1.0
CG A:GLU313 3.8 40.7 1.0
N A:ALA316 4.2 40.3 1.0
ND2 A:ASN318 4.2 36.1 1.0
O A:TRP314 4.2 42.4 1.0
CA A:GLU313 4.2 38.6 1.0
C A:TRP314 4.3 40.5 1.0
CA A:ALA316 4.4 34.6 1.0
C A:TYR315 4.5 39.0 1.0
N A:TRP314 4.5 36.0 1.0
OE1 A:GLU313 4.5 45.8 1.0
N A:GLY317 4.5 35.0 1.0
N A:ASN318 4.6 34.8 1.0
CA A:TRP314 4.6 33.0 1.0
CB A:ASN318 4.6 37.6 1.0
O A:TYR315 4.7 31.2 1.0
CB A:GLU313 4.7 42.6 1.0
CA A:GLY317 4.7 30.9 1.0
N A:TYR315 4.7 33.7 1.0
C A:GLY317 4.8 34.7 1.0
CB A:ALA316 4.8 35.8 1.0

Reference:

A.Joachimiak, M.Cuff, R.Wu, M.Endres, P.R.Pokkuluri, A.Joachimiak, Midwest Center Forstructural Genomics (Mcsg). N/A N/A.
Page generated: Sun Jul 14 18:47:07 2024

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