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Calcium in PDB 5h5h: Staphylococcus Aureus Ftsz-Gdp R29A Mutant in T State

Protein crystallography data

The structure of Staphylococcus Aureus Ftsz-Gdp R29A Mutant in T State, PDB code: 5h5h was solved by J.Fujita, R.Harada, Y.Maeda, Y.Saito, E.Mizohata, T.Inoue, Y.Shigeta, H.Matsumura, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 41.40 / 1.70
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 71.525, 50.834, 88.477, 90.00, 110.63, 90.00
R / Rfree (%) 18.2 / 22.6

Calcium Binding Sites:

The binding sites of Calcium atom in the Staphylococcus Aureus Ftsz-Gdp R29A Mutant in T State (pdb code 5h5h). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Staphylococcus Aureus Ftsz-Gdp R29A Mutant in T State, PDB code: 5h5h:

Calcium binding site 1 out of 1 in 5h5h

Go back to Calcium Binding Sites List in 5h5h
Calcium binding site 1 out of 1 in the Staphylococcus Aureus Ftsz-Gdp R29A Mutant in T State


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Staphylococcus Aureus Ftsz-Gdp R29A Mutant in T State within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca402

b:19.7
occ:0.80
O A:HOH667 2.4 30.5 0.5
O A:VAL203 2.4 28.5 1.0
O A:LEU200 2.5 30.8 1.0
O A:LEU209 2.5 20.1 1.0
OD1 A:ASN208 2.7 22.2 1.0
O A:HOH667 3.5 29.1 0.5
CG A:ASN208 3.6 22.4 1.0
O A:ILE201 3.6 38.8 1.0
C A:VAL203 3.6 31.5 1.0
C A:LEU200 3.7 34.5 1.0
C A:LEU209 3.8 19.6 1.0
ND2 A:ASN208 3.8 22.8 1.0
C A:ILE201 4.0 34.6 1.0
CA A:ILE201 4.2 34.4 1.0
CA A:SER204 4.3 32.3 1.0
N A:LEU209 4.4 20.3 1.0
N A:VAL203 4.4 29.0 1.0
N A:ILE201 4.4 34.6 1.0
N A:SER204 4.4 30.7 1.0
N A:GLY205 4.5 22.3 1.0
CA A:VAL203 4.6 31.8 1.0
CA A:ASP210 4.6 22.4 1.0
CA A:LEU209 4.7 21.0 1.0
N A:ASP210 4.7 20.4 1.0
N A:ALA202 4.9 30.5 1.0
CB A:ASP210 4.9 24.0 1.0
CA A:LEU200 4.9 32.5 1.0
CB A:ASN208 4.9 20.4 1.0
C A:SER204 4.9 28.3 1.0
C A:ALA202 5.0 31.2 1.0
O A:HOH581 5.0 23.5 1.0

Reference:

J.Fujita, R.Harada, Y.Maeda, Y.Saito, E.Mizohata, T.Inoue, Y.Shigeta, H.Matsumura. Identification of the Key Interactions in Structural Transition Pathway of Ftsz From Staphylococcus Aureus J. Struct. Biol. V. 198 65 2017.
ISSN: ISSN 1047-8477
PubMed: 28456664
DOI: 10.1016/J.JSB.2017.04.008
Page generated: Sun Jul 14 19:53:47 2024

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