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Calcium in PDB 5hj8: Bacterial Sodium Channel Neck 3G Mutant

Protein crystallography data

The structure of Bacterial Sodium Channel Neck 3G Mutant, PDB code: 5hj8 was solved by A.Rohaim, D.L.Minor, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 15.00 / 3.70
Space group I 2 2 2
Cell size a, b, c (Å), α, β, γ (°) 138.310, 153.350, 165.810, 90.00, 90.00, 90.00
R / Rfree (%) 27.8 / 30.4

Calcium Binding Sites:

The binding sites of Calcium atom in the Bacterial Sodium Channel Neck 3G Mutant (pdb code 5hj8). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Bacterial Sodium Channel Neck 3G Mutant, PDB code: 5hj8:

Calcium binding site 1 out of 1 in 5hj8

Go back to Calcium Binding Sites List in 5hj8
Calcium binding site 1 out of 1 in the Bacterial Sodium Channel Neck 3G Mutant


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Bacterial Sodium Channel Neck 3G Mutant within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca301

b:0.9
occ:1.00
O B:LEU196 3.1 0.7 1.0
O A:LEU196 3.3 0.1 1.0
O C:LEU196 3.6 0.1 1.0
O D:LEU196 3.8 0.8 1.0
C B:LEU196 4.2 0.2 1.0
CA B:GLU197 4.2 0.2 1.0
CA A:GLU197 4.3 0.5 1.0
C A:LEU196 4.5 0.5 1.0
N B:SER198 4.7 0.4 1.0
N B:GLU197 4.7 0.1 1.0
C C:LEU196 4.8 0.2 1.0
CA D:GLU197 4.8 0.1 1.0
N A:SER198 4.8 0.9 1.0
CA C:GLU197 4.9 0.9 1.0
N A:GLU197 4.9 0.1 1.0
C D:LEU196 4.9 0.5 1.0
CB A:GLU197 5.0 0.5 1.0

Reference:

C.Arrigoni, A.Rohaim, D.Shaya, F.Findeisen, R.A.Stein, S.R.Nurva, S.Mishra, H.S.Mchaourab, D.L.Minor. Unfolding of A Temperature-Sensitive Domain Controls Voltage-Gated Channel Activation. Cell V. 164 922 2016.
ISSN: ISSN 1097-4172
PubMed: 26919429
DOI: 10.1016/J.CELL.2016.02.001
Page generated: Sun Jul 14 20:01:46 2024

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