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Calcium in PDB 5jv3: The Neck-Linker and Alpha 7 Helix of Homo Sapiens EG5 Fused to EB1

Protein crystallography data

The structure of The Neck-Linker and Alpha 7 Helix of Homo Sapiens EG5 Fused to EB1, PDB code: 5jv3 was solved by R.K.Phillips, I.Rayment, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 30.62 / 2.01
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 34.839, 59.502, 72.664, 90.00, 100.58, 90.00
R / Rfree (%) 21.5 / 24.7

Calcium Binding Sites:

The binding sites of Calcium atom in the The Neck-Linker and Alpha 7 Helix of Homo Sapiens EG5 Fused to EB1 (pdb code 5jv3). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the The Neck-Linker and Alpha 7 Helix of Homo Sapiens EG5 Fused to EB1, PDB code: 5jv3:

Calcium binding site 1 out of 1 in 5jv3

Go back to Calcium Binding Sites List in 5jv3
Calcium binding site 1 out of 1 in the The Neck-Linker and Alpha 7 Helix of Homo Sapiens EG5 Fused to EB1


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of The Neck-Linker and Alpha 7 Helix of Homo Sapiens EG5 Fused to EB1 within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Ca101

b:42.2
occ:1.00
O D:HOH230 2.5 52.3 1.0
OE2 D:GLU14 2.5 30.6 1.0
OE1 D:GLU14 2.5 25.0 1.0
CD D:GLU14 2.9 26.5 1.0
NZ D:LYS13 4.1 44.0 1.0
O D:HOH218 4.4 20.1 1.0
CG D:GLU14 4.4 26.8 1.0
OE2 D:GLU17 4.4 60.2 1.0
O D:HOH223 4.9 36.8 1.0

Reference:

R.K.Phillips, L.G.Peter, S.P.Gilbert, I.Rayment. Family-Specific Kinesin Structures Reveal Neck-Linker Length Based on Initiation of the Coiled-Coil. J.Biol.Chem. V. 291 20372 2016.
ISSN: ESSN 1083-351X
PubMed: 27462072
DOI: 10.1074/JBC.M116.737577
Page generated: Wed Jul 9 07:13:08 2025

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