Calcium in PDB 5o2y: uc(Nmr) Structure of the Calcium Bound Form of Pulg, Major Pseudopilin From Klebsiella Oxytoca T2SS

The binding sites of Calcium atom in the uc(Nmr) Structure of the Calcium Bound Form of Pulg, Major Pseudopilin From Klebsiella Oxytoca T2SS (pdb code 5o2y). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the uc(Nmr) Structure of the Calcium Bound Form of Pulg, Major Pseudopilin From Klebsiella Oxytoca T2SS, PDB code: 5o2y:

Calcium binding site 1 out of 1 in the uc(Nmr) Structure of the Calcium Bound Form of Pulg, Major Pseudopilin From Klebsiella Oxytoca T2SS


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of uc(Nmr) Structure of the Calcium Bound Form of Pulg, Major Pseudopilin From Klebsiella Oxytoca T2SS within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca201 b:0.0 occ:1.00 HG A:SER122 1.7 0.0 1.0 OD1 A:ASP124 1.8 0.0 1.0 OD2 A:ASP124 1.8 0.0 1.0 CG A:ASP124 2.1 0.0 1.0 OG A:SER122 2.5 0.0 1.0 O A:LEU114 2.5 0.0 1.0 O A:VAL119 2.5 0.0 1.0 OD2 A:ASP125 2.5 0.0 1.0 OD2 A:ASP117 2.5 0.0 1.0 HG22 A:VAL119 2.8 0.0 1.0 HA A:LEU114 3.1 0.0 1.0 C A:LEU114 3.2 0.0 1.0 HG23 A:VAL119 3.3 0.0 1.0 H A:VAL119 3.4 0.0 1.0 CG2 A:VAL119 3.5 0.0 1.0 CG A:ASP117 3.5 0.0 1.0 CG A:ASP125 3.5 0.0 1.0 HA A:ASP125 3.5 0.0 1.0 CB A:ASP124 3.6 0.0 1.0 C A:VAL119 3.6 0.0 1.0 CB A:SER122 3.7 0.0 1.0 HB2 A:SER122 3.7 0.0 1.0 CA A:LEU114 3.7 0.0 1.0 N A:ASP125 3.7 0.0 1.0 H A:ASP125 3.7 0.0 1.0 OD1 A:ASP117 3.8 0.0 1.0 N A:VAL119 3.9 0.0 1.0 O A:SER113 4.0 0.0 1.0 HA3 A:GLY115 4.0 0.0 1.0 CA A:ASP125 4.0 0.0 1.0 C A:ASP124 4.1 0.0 1.0 HB2 A:ASP124 4.1 0.0 1.0 HB3 A:ASP124 4.1 0.0 1.0 CA A:VAL119 4.1 0.0 1.0 H A:SER122 4.2 0.0 1.0 HB3 A:SER122 4.2 0.0 1.0 N A:GLY115 4.2 0.0 1.0 H A:ASP124 4.3 0.0 1.0 HG21 A:VAL119 4.3 0.0 1.0 CA A:ASP124 4.3 0.0 1.0 OD1 A:ASP125 4.3 0.0 1.0 HB3 A:LEU114 4.3 0.0 1.0 CB A:ASP125 4.3 0.0 1.0 CB A:VAL119 4.4 0.0 1.0 H A:GLY118 4.5 0.0 1.0 N A:ASP124 4.6 0.0 1.0 H A:ASP117 4.6 0.0 1.0 CA A:GLY115 4.7 0.0 1.0 HA A:PRO120 4.7 0.0 1.0 CB A:LEU114 4.7 0.0 1.0 HB2 A:ASP125 4.7 0.0 1.0 N A:PRO120 4.7 0.0 1.0 O A:ASP124 4.7 0.0 1.0 CA A:SER122 4.7 0.0 1.0 N A:LEU114 4.7 0.0 1.0 C A:SER113 4.8 0.0 1.0 N A:GLY118 4.8 0.0 1.0 C A:GLY118 4.9 0.0 1.0 CB A:ASP117 4.9 0.0 1.0 N A:SER122 4.9 0.0 1.0 HD12 A:LEU114 4.9 0.0 1.0 HB A:VAL119 4.9 0.0 1.0 HD11 A:LEU114 4.9 0.0 1.0 HB2 A:ASP117 5.0 0.0 1.0 H A:GLY115 5.0 0.0 1.0

A.Lopez-Castilla, J.L.Thomassin, B.Bardiaux, W.Zheng, M.Nivaskumar, X.Yu, M.Nilges, E.H.Egelman, N.Izadi-Pruneyre, O.Francetic. Structure of the Calcium-Dependent Type 2 Secretion Pseudopilus. Nat Microbiol V. 2 1686 2017.
ISSN: ESSN 2058-5276
PubMed: 28993624
DOI: 10.1038/S41564-017-0041-2