Calcium in PDB 5wda: Structure of the Pulg Pseudopilus

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>>> Page 1 <<< Page 2, Binding sites: 11 - 20; Page 3, Binding sites: 21 - 25;

Binding sites:

The binding sites of Calcium atom in the Structure of the Pulg Pseudopilus (pdb code 5wda). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 25 binding sites of Calcium where determined in the Structure of the Pulg Pseudopilus, PDB code: 5wda:
Jump to Calcium binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Calcium binding site 1 out of 25 in the Structure of the Pulg Pseudopilus


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Structure of the Pulg Pseudopilus within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca201 b:0.8 occ:1.00 OG A:SER122 2.4 0.4 1.0 O A:VAL119 2.4 0.3 1.0 H A:ASN123 2.5 0.6 1.0 N A:SER122 2.7 0.4 1.0 OD2 A:ASP117 2.7 0.5 1.0 H A:ASP124 2.8 0.3 1.0 HB A:VAL119 3.1 0.3 1.0 N A:ASN123 3.2 0.6 1.0 C A:VAL119 3.2 0.3 1.0 CB A:SER122 3.2 0.4 1.0 H A:GLU121 3.3 0.5 1.0 CA A:SER122 3.3 0.4 1.0 OD1 A:ASP117 3.4 0.5 1.0 N A:ASP124 3.4 0.3 1.0 CG A:ASP117 3.4 0.5 1.0 HB3 A:SER122 3.4 0.4 1.0 N A:GLU121 3.5 0.5 1.0 HG12 A:VAL119 3.6 0.3 1.0 O A:LEU114 3.6 0.3 1.0 C A:GLU121 3.7 0.5 1.0 C A:SER122 3.7 0.4 1.0 HB2 A:ASP124 3.7 0.3 1.0 CB A:VAL119 3.8 0.3 1.0 H A:VAL119 3.8 0.3 1.0 C A:PRO120 3.8 0.1 1.0 C A:ASP124 3.9 0.3 1.0 CA A:GLU121 3.9 0.5 1.0 HB3 A:ASP125 4.0 0.7 1.0 HA A:GLU121 4.0 0.5 1.0 CA A:VAL119 4.0 0.3 1.0 N A:PRO120 4.0 0.1 1.0 N A:ASP125 4.0 0.7 1.0 HA A:PRO120 4.1 0.1 1.0 CA A:ASP124 4.1 0.3 1.0 CG1 A:VAL119 4.1 0.3 1.0 HB2 A:SER122 4.1 0.4 1.0 O A:ASP124 4.1 0.3 1.0 CA A:PRO120 4.2 0.1 1.0 H A:ASP125 4.2 0.7 1.0 HA A:LEU114 4.2 0.3 1.0 C A:ASN123 4.2 0.6 1.0 HA A:SER122 4.3 0.4 1.0 CA A:ASN123 4.3 0.6 1.0 N A:VAL119 4.3 0.3 1.0 HA A:ASP125 4.3 0.7 1.0 CB A:ASP124 4.4 0.3 1.0 HG11 A:VAL119 4.4 0.3 1.0 O A:PRO120 4.4 0.1 1.0 CA A:ASP125 4.6 0.7 1.0 C A:LEU114 4.6 0.3 1.0 HB2 A:ASN123 4.7 0.6 1.0 CB A:ASP125 4.7 0.7 1.0 O A:GLU121 4.8 0.5 1.0 O A:SER113 4.8 0.4 1.0 HA A:VAL119 4.9 0.3 1.0 CB A:ASP117 4.9 0.5 1.0 O A:SER122 4.9 0.4 1.0 CA A:LEU114 4.9 0.3 1.0 HG13 A:VAL119 4.9 0.3 1.0 HA A:ASP124 5.0 0.3 1.0 HA A:ASN123 5.0 0.6 1.0

Calcium binding site 2 out of 25 in the Structure of the Pulg Pseudopilus


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Structure of the Pulg Pseudopilus within 5.0Å range: probe atom residue distance (Å) B Occ B:Ca201 b:0.8 occ:1.00 OG B:SER122 2.4 0.4 1.0 O B:VAL119 2.4 0.3 1.0 H B:ASN123 2.5 0.6 1.0 N B:SER122 2.7 0.4 1.0 OD2 B:ASP117 2.7 0.5 1.0 H B:ASP124 2.8 0.3 1.0 HB B:VAL119 3.1 0.3 1.0 N B:ASN123 3.2 0.6 1.0 C B:VAL119 3.2 0.3 1.0 CB B:SER122 3.2 0.4 1.0 H B:GLU121 3.3 0.5 1.0 CA B:SER122 3.3 0.4 1.0 OD1 B:ASP117 3.4 0.5 1.0 N B:ASP124 3.4 0.3 1.0 CG B:ASP117 3.4 0.5 1.0 HB3 B:SER122 3.4 0.4 1.0 N B:GLU121 3.5 0.5 1.0 HG12 B:VAL119 3.6 0.3 1.0 O B:LEU114 3.6 0.3 1.0 C B:GLU121 3.7 0.5 1.0 C B:SER122 3.7 0.4 1.0 HB2 B:ASP124 3.7 0.3 1.0 CB B:VAL119 3.8 0.3 1.0 H B:VAL119 3.8 0.3 1.0 C B:PRO120 3.8 0.1 1.0 C B:ASP124 3.9 0.3 1.0 CA B:GLU121 3.9 0.5 1.0 HB3 B:ASP125 4.0 0.7 1.0 HA B:GLU121 4.0 0.5 1.0 CA B:VAL119 4.0 0.3 1.0 N B:PRO120 4.0 0.1 1.0 N B:ASP125 4.0 0.7 1.0 HA B:PRO120 4.1 0.1 1.0 CA B:ASP124 4.1 0.3 1.0 CG1 B:VAL119 4.1 0.3 1.0 HB2 B:SER122 4.1 0.4 1.0 O B:ASP124 4.1 0.3 1.0 CA B:PRO120 4.2 0.1 1.0 H B:ASP125 4.2 0.7 1.0 HA B:LEU114 4.2 0.3 1.0 C B:ASN123 4.2 0.6 1.0 HA B:SER122 4.3 0.4 1.0 CA B:ASN123 4.3 0.6 1.0 N B:VAL119 4.3 0.3 1.0 HA B:ASP125 4.3 0.7 1.0 CB B:ASP124 4.4 0.3 1.0 HG11 B:VAL119 4.4 0.3 1.0 O B:PRO120 4.4 0.1 1.0 CA B:ASP125 4.6 0.7 1.0 C B:LEU114 4.6 0.3 1.0 HB2 B:ASN123 4.7 0.6 1.0 CB B:ASP125 4.7 0.7 1.0 O B:GLU121 4.8 0.5 1.0 O B:SER113 4.8 0.4 1.0 HA B:VAL119 4.9 0.3 1.0 CB B:ASP117 4.9 0.5 1.0 O B:SER122 4.9 0.4 1.0 CA B:LEU114 4.9 0.3 1.0 HG13 B:VAL119 4.9 0.3 1.0 HA B:ASP124 5.0 0.3 1.0 HA B:ASN123 5.0 0.6 1.0

Calcium binding site 3 out of 25 in the Structure of the Pulg Pseudopilus


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 3 of Structure of the Pulg Pseudopilus within 5.0Å range: probe atom residue distance (Å) B Occ C:Ca201 b:0.8 occ:1.00 OG C:SER122 2.4 0.4 1.0 O C:VAL119 2.4 0.3 1.0 H C:ASN123 2.5 0.6 1.0 N C:SER122 2.7 0.4 1.0 OD2 C:ASP117 2.7 0.5 1.0 H C:ASP124 2.8 0.3 1.0 HB C:VAL119 3.1 0.3 1.0 N C:ASN123 3.2 0.6 1.0 C C:VAL119 3.2 0.3 1.0 CB C:SER122 3.2 0.4 1.0 H C:GLU121 3.3 0.5 1.0 CA C:SER122 3.3 0.4 1.0 OD1 C:ASP117 3.4 0.5 1.0 N C:ASP124 3.4 0.3 1.0 CG C:ASP117 3.4 0.5 1.0 HB3 C:SER122 3.4 0.4 1.0 N C:GLU121 3.5 0.5 1.0 HG12 C:VAL119 3.6 0.3 1.0 O C:LEU114 3.6 0.3 1.0 C C:GLU121 3.7 0.5 1.0 C C:SER122 3.7 0.4 1.0 HB2 C:ASP124 3.7 0.3 1.0 CB C:VAL119 3.8 0.3 1.0 H C:VAL119 3.8 0.3 1.0 C C:PRO120 3.8 0.1 1.0 C C:ASP124 3.9 0.3 1.0 CA C:GLU121 3.9 0.5 1.0 HB3 C:ASP125 4.0 0.7 1.0 HA C:GLU121 4.0 0.5 1.0 CA C:VAL119 4.0 0.3 1.0 N C:PRO120 4.0 0.1 1.0 N C:ASP125 4.0 0.7 1.0 HA C:PRO120 4.1 0.1 1.0 CA C:ASP124 4.1 0.3 1.0 CG1 C:VAL119 4.1 0.3 1.0 HB2 C:SER122 4.1 0.4 1.0 O C:ASP124 4.1 0.3 1.0 CA C:PRO120 4.2 0.1 1.0 H C:ASP125 4.2 0.7 1.0 HA C:LEU114 4.2 0.3 1.0 C C:ASN123 4.2 0.6 1.0 HA C:SER122 4.3 0.4 1.0 CA C:ASN123 4.3 0.6 1.0 N C:VAL119 4.3 0.3 1.0 HA C:ASP125 4.3 0.7 1.0 CB C:ASP124 4.4 0.3 1.0 HG11 C:VAL119 4.4 0.3 1.0 O C:PRO120 4.4 0.1 1.0 CA C:ASP125 4.6 0.7 1.0 C C:LEU114 4.6 0.3 1.0 HB2 C:ASN123 4.7 0.6 1.0 CB C:ASP125 4.7 0.7 1.0 O C:GLU121 4.8 0.5 1.0 O C:SER113 4.8 0.4 1.0 HA C:VAL119 4.9 0.3 1.0 CB C:ASP117 4.9 0.5 1.0 O C:SER122 4.9 0.4 1.0 CA C:LEU114 4.9 0.3 1.0 HG13 C:VAL119 4.9 0.3 1.0 HA C:ASP124 5.0 0.3 1.0 HA C:ASN123 5.0 0.6 1.0

Calcium binding site 4 out of 25 in the Structure of the Pulg Pseudopilus


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 4 of Structure of the Pulg Pseudopilus within 5.0Å range: probe atom residue distance (Å) B Occ D:Ca201 b:0.8 occ:1.00 OG D:SER122 2.4 0.4 1.0 O D:VAL119 2.4 0.3 1.0 H D:ASN123 2.5 0.6 1.0 N D:SER122 2.7 0.4 1.0 OD2 D:ASP117 2.7 0.5 1.0 H D:ASP124 2.8 0.3 1.0 HB D:VAL119 3.1 0.3 1.0 N D:ASN123 3.2 0.6 1.0 C D:VAL119 3.2 0.3 1.0 CB D:SER122 3.2 0.4 1.0 H D:GLU121 3.3 0.5 1.0 CA D:SER122 3.3 0.4 1.0 OD1 D:ASP117 3.4 0.5 1.0 N D:ASP124 3.4 0.3 1.0 CG D:ASP117 3.4 0.5 1.0 HB3 D:SER122 3.4 0.4 1.0 N D:GLU121 3.5 0.5 1.0 HG12 D:VAL119 3.6 0.3 1.0 O D:LEU114 3.6 0.3 1.0 C D:GLU121 3.7 0.5 1.0 C D:SER122 3.7 0.4 1.0 HB2 D:ASP124 3.7 0.3 1.0 CB D:VAL119 3.8 0.3 1.0 H D:VAL119 3.8 0.3 1.0 C D:PRO120 3.8 0.1 1.0 C D:ASP124 3.9 0.3 1.0 CA D:GLU121 3.9 0.5 1.0 HB3 D:ASP125 4.0 0.7 1.0 CA D:VAL119 4.0 0.3 1.0 HA D:GLU121 4.0 0.5 1.0 N D:PRO120 4.0 0.1 1.0 N D:ASP125 4.0 0.7 1.0 HA D:PRO120 4.1 0.1 1.0 CA D:ASP124 4.1 0.3 1.0 CG1 D:VAL119 4.1 0.3 1.0 HB2 D:SER122 4.1 0.4 1.0 O D:ASP124 4.1 0.3 1.0 CA D:PRO120 4.2 0.1 1.0 H D:ASP125 4.2 0.7 1.0 HA D:LEU114 4.2 0.3 1.0 C D:ASN123 4.2 0.6 1.0 HA D:SER122 4.3 0.4 1.0 CA D:ASN123 4.3 0.6 1.0 N D:VAL119 4.3 0.3 1.0 HA D:ASP125 4.3 0.7 1.0 CB D:ASP124 4.4 0.3 1.0 HG11 D:VAL119 4.4 0.3 1.0 O D:PRO120 4.4 0.1 1.0 CA D:ASP125 4.6 0.7 1.0 C D:LEU114 4.6 0.3 1.0 HB2 D:ASN123 4.7 0.6 1.0 CB D:ASP125 4.7 0.7 1.0 O D:GLU121 4.8 0.5 1.0 O D:SER113 4.8 0.4 1.0 HA D:VAL119 4.9 0.3 1.0 CB D:ASP117 4.9 0.5 1.0 O D:SER122 4.9 0.4 1.0 CA D:LEU114 4.9 0.3 1.0 HG13 D:VAL119 4.9 0.3 1.0 HA D:ASP124 5.0 0.3 1.0 HA D:ASN123 5.0 0.6 1.0

Calcium binding site 5 out of 25 in the Structure of the Pulg Pseudopilus


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 5 of Structure of the Pulg Pseudopilus within 5.0Å range: probe atom residue distance (Å) B Occ E:Ca201 b:0.8 occ:1.00 OG E:SER122 2.4 0.4 1.0 O E:VAL119 2.4 0.3 1.0 H E:ASN123 2.5 0.6 1.0 N E:SER122 2.7 0.4 1.0 OD2 E:ASP117 2.7 0.5 1.0 H E:ASP124 2.8 0.3 1.0 HB E:VAL119 3.1 0.3 1.0 N E:ASN123 3.2 0.6 1.0 C E:VAL119 3.2 0.3 1.0 CB E:SER122 3.2 0.4 1.0 H E:GLU121 3.3 0.5 1.0 CA E:SER122 3.3 0.4 1.0 OD1 E:ASP117 3.4 0.5 1.0 N E:ASP124 3.4 0.3 1.0 CG E:ASP117 3.4 0.5 1.0 HB3 E:SER122 3.4 0.4 1.0 N E:GLU121 3.5 0.5 1.0 HG12 E:VAL119 3.6 0.3 1.0 O E:LEU114 3.6 0.3 1.0 C E:GLU121 3.7 0.5 1.0 C E:SER122 3.7 0.4 1.0 HB2 E:ASP124 3.7 0.3 1.0 CB E:VAL119 3.8 0.3 1.0 H E:VAL119 3.8 0.3 1.0 C E:PRO120 3.8 0.1 1.0 C E:ASP124 3.9 0.3 1.0 CA E:GLU121 3.9 0.5 1.0 HB3 E:ASP125 4.0 0.7 1.0 CA E:VAL119 4.0 0.3 1.0 HA E:GLU121 4.0 0.5 1.0 N E:PRO120 4.0 0.1 1.0 N E:ASP125 4.0 0.7 1.0 HA E:PRO120 4.1 0.1 1.0 CA E:ASP124 4.1 0.3 1.0 CG1 E:VAL119 4.1 0.3 1.0 HB2 E:SER122 4.1 0.4 1.0 O E:ASP124 4.1 0.3 1.0 CA E:PRO120 4.2 0.1 1.0 H E:ASP125 4.2 0.7 1.0 HA E:LEU114 4.2 0.3 1.0 C E:ASN123 4.2 0.6 1.0 HA E:SER122 4.3 0.4 1.0 CA E:ASN123 4.3 0.6 1.0 N E:VAL119 4.3 0.3 1.0 HA E:ASP125 4.3 0.7 1.0 CB E:ASP124 4.4 0.3 1.0 HG11 E:VAL119 4.4 0.3 1.0 O E:PRO120 4.4 0.1 1.0 CA E:ASP125 4.6 0.7 1.0 C E:LEU114 4.6 0.3 1.0 HB2 E:ASN123 4.7 0.6 1.0 CB E:ASP125 4.7 0.7 1.0 O E:GLU121 4.8 0.5 1.0 O E:SER113 4.8 0.4 1.0 HA E:VAL119 4.9 0.3 1.0 CB E:ASP117 4.9 0.5 1.0 O E:SER122 4.9 0.4 1.0 CA E:LEU114 4.9 0.3 1.0 HG13 E:VAL119 4.9 0.3 1.0 HA E:ASP124 5.0 0.3 1.0 HA E:ASN123 5.0 0.6 1.0

Calcium binding site 6 out of 25 in the Structure of the Pulg Pseudopilus


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 6 of Structure of the Pulg Pseudopilus within 5.0Å range: probe atom residue distance (Å) B Occ F:Ca201 b:0.8 occ:1.00 OG F:SER122 2.4 0.4 1.0 O F:VAL119 2.4 0.3 1.0 H F:ASN123 2.5 0.6 1.0 N F:SER122 2.7 0.4 1.0 OD2 F:ASP117 2.7 0.5 1.0 H F:ASP124 2.8 0.3 1.0 HB F:VAL119 3.1 0.3 1.0 N F:ASN123 3.2 0.6 1.0 C F:VAL119 3.2 0.3 1.0 CB F:SER122 3.2 0.4 1.0 H F:GLU121 3.3 0.5 1.0 CA F:SER122 3.3 0.4 1.0 OD1 F:ASP117 3.4 0.5 1.0 N F:ASP124 3.4 0.3 1.0 CG F:ASP117 3.4 0.5 1.0 HB3 F:SER122 3.4 0.4 1.0 N F:GLU121 3.5 0.5 1.0 HG12 F:VAL119 3.6 0.3 1.0 O F:LEU114 3.6 0.3 1.0 C F:GLU121 3.7 0.5 1.0 C F:SER122 3.7 0.4 1.0 HB2 F:ASP124 3.7 0.3 1.0 CB F:VAL119 3.8 0.3 1.0 H F:VAL119 3.8 0.3 1.0 C F:PRO120 3.8 0.1 1.0 C F:ASP124 3.9 0.3 1.0 CA F:GLU121 3.9 0.5 1.0 HB3 F:ASP125 4.0 0.7 1.0 HA F:GLU121 4.0 0.5 1.0 CA F:VAL119 4.0 0.3 1.0 N F:PRO120 4.0 0.1 1.0 N F:ASP125 4.0 0.7 1.0 HA F:PRO120 4.1 0.1 1.0 CA F:ASP124 4.1 0.3 1.0 CG1 F:VAL119 4.1 0.3 1.0 HB2 F:SER122 4.1 0.4 1.0 O F:ASP124 4.1 0.3 1.0 CA F:PRO120 4.2 0.1 1.0 H F:ASP125 4.2 0.7 1.0 HA F:LEU114 4.2 0.3 1.0 C F:ASN123 4.2 0.6 1.0 HA F:SER122 4.3 0.4 1.0 CA F:ASN123 4.3 0.6 1.0 N F:VAL119 4.3 0.3 1.0 HA F:ASP125 4.3 0.7 1.0 CB F:ASP124 4.4 0.3 1.0 HG11 F:VAL119 4.4 0.3 1.0 O F:PRO120 4.4 0.1 1.0 CA F:ASP125 4.6 0.7 1.0 C F:LEU114 4.6 0.3 1.0 HB2 F:ASN123 4.7 0.6 1.0 CB F:ASP125 4.7 0.7 1.0 O F:GLU121 4.8 0.5 1.0 O F:SER113 4.8 0.4 1.0 HA F:VAL119 4.9 0.3 1.0 CB F:ASP117 4.9 0.5 1.0 O F:SER122 4.9 0.4 1.0 CA F:LEU114 4.9 0.3 1.0 HG13 F:VAL119 4.9 0.3 1.0 HA F:ASP124 5.0 0.3 1.0 HA F:ASN123 5.0 0.6 1.0

Calcium binding site 7 out of 25 in the Structure of the Pulg Pseudopilus


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 7 of Structure of the Pulg Pseudopilus within 5.0Å range: probe atom residue distance (Å) B Occ G:Ca201 b:0.8 occ:1.00 OG G:SER122 2.4 0.4 1.0 O G:VAL119 2.4 0.3 1.0 H G:ASN123 2.5 0.6 1.0 N G:SER122 2.7 0.4 1.0 OD2 G:ASP117 2.7 0.5 1.0 H G:ASP124 2.8 0.3 1.0 HB G:VAL119 3.1 0.3 1.0 N G:ASN123 3.2 0.6 1.0 C G:VAL119 3.2 0.3 1.0 CB G:SER122 3.2 0.4 1.0 H G:GLU121 3.3 0.5 1.0 CA G:SER122 3.3 0.4 1.0 OD1 G:ASP117 3.4 0.5 1.0 N G:ASP124 3.4 0.3 1.0 CG G:ASP117 3.4 0.5 1.0 HB3 G:SER122 3.4 0.4 1.0 N G:GLU121 3.5 0.5 1.0 HG12 G:VAL119 3.6 0.3 1.0 O G:LEU114 3.6 0.3 1.0 C G:GLU121 3.7 0.5 1.0 C G:SER122 3.7 0.4 1.0 HB2 G:ASP124 3.7 0.3 1.0 CB G:VAL119 3.8 0.3 1.0 H G:VAL119 3.8 0.3 1.0 C G:PRO120 3.8 0.1 1.0 C G:ASP124 3.9 0.3 1.0 CA G:GLU121 3.9 0.5 1.0 HB3 G:ASP125 4.0 0.7 1.0 HA G:GLU121 4.0 0.5 1.0 CA G:VAL119 4.0 0.3 1.0 N G:PRO120 4.0 0.1 1.0 N G:ASP125 4.0 0.7 1.0 HA G:PRO120 4.1 0.1 1.0 CA G:ASP124 4.1 0.3 1.0 CG1 G:VAL119 4.1 0.3 1.0 HB2 G:SER122 4.1 0.4 1.0 O G:ASP124 4.1 0.3 1.0 CA G:PRO120 4.2 0.1 1.0 H G:ASP125 4.2 0.7 1.0 HA G:LEU114 4.2 0.3 1.0 C G:ASN123 4.2 0.6 1.0 HA G:SER122 4.3 0.4 1.0 CA G:ASN123 4.3 0.6 1.0 N G:VAL119 4.3 0.3 1.0 HA G:ASP125 4.3 0.7 1.0 CB G:ASP124 4.4 0.3 1.0 HG11 G:VAL119 4.4 0.3 1.0 O G:PRO120 4.4 0.1 1.0 CA G:ASP125 4.6 0.7 1.0 C G:LEU114 4.6 0.3 1.0 HB2 G:ASN123 4.7 0.6 1.0 CB G:ASP125 4.7 0.7 1.0 O G:GLU121 4.8 0.5 1.0 O G:SER113 4.8 0.4 1.0 HA G:VAL119 4.9 0.3 1.0 CB G:ASP117 4.9 0.5 1.0 O G:SER122 4.9 0.4 1.0 CA G:LEU114 4.9 0.3 1.0 HG13 G:VAL119 4.9 0.3 1.0 HA G:ASP124 5.0 0.3 1.0 HA G:ASN123 5.0 0.6 1.0

Calcium binding site 8 out of 25 in the Structure of the Pulg Pseudopilus


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 8 of Structure of the Pulg Pseudopilus within 5.0Å range: probe atom residue distance (Å) B Occ H:Ca201 b:0.8 occ:1.00 OG H:SER122 2.4 0.4 1.0 O H:VAL119 2.4 0.3 1.0 H H:ASN123 2.5 0.6 1.0 N H:SER122 2.7 0.4 1.0 OD2 H:ASP117 2.7 0.5 1.0 H H:ASP124 2.8 0.3 1.0 HB H:VAL119 3.1 0.3 1.0 N H:ASN123 3.2 0.6 1.0 C H:VAL119 3.2 0.3 1.0 CB H:SER122 3.2 0.4 1.0 H H:GLU121 3.3 0.5 1.0 CA H:SER122 3.3 0.4 1.0 OD1 H:ASP117 3.4 0.5 1.0 N H:ASP124 3.4 0.3 1.0 CG H:ASP117 3.4 0.5 1.0 HB3 H:SER122 3.4 0.4 1.0 N H:GLU121 3.5 0.5 1.0 HG12 H:VAL119 3.6 0.3 1.0 O H:LEU114 3.6 0.3 1.0 C H:GLU121 3.7 0.5 1.0 C H:SER122 3.7 0.4 1.0 HB2 H:ASP124 3.7 0.3 1.0 CB H:VAL119 3.8 0.3 1.0 H H:VAL119 3.8 0.3 1.0 C H:PRO120 3.8 0.1 1.0 C H:ASP124 3.9 0.3 1.0 CA H:GLU121 3.9 0.5 1.0 HB3 H:ASP125 4.0 0.7 1.0 CA H:VAL119 4.0 0.3 1.0 HA H:GLU121 4.0 0.5 1.0 N H:PRO120 4.0 0.1 1.0 N H:ASP125 4.0 0.7 1.0 HA H:PRO120 4.1 0.1 1.0 CA H:ASP124 4.1 0.3 1.0 CG1 H:VAL119 4.1 0.3 1.0 HB2 H:SER122 4.1 0.4 1.0 O H:ASP124 4.1 0.3 1.0 CA H:PRO120 4.2 0.1 1.0 H H:ASP125 4.2 0.7 1.0 HA H:LEU114 4.2 0.3 1.0 C H:ASN123 4.2 0.6 1.0 HA H:SER122 4.3 0.4 1.0 CA H:ASN123 4.3 0.6 1.0 N H:VAL119 4.3 0.3 1.0 HA H:ASP125 4.3 0.7 1.0 CB H:ASP124 4.4 0.3 1.0 HG11 H:VAL119 4.4 0.3 1.0 O H:PRO120 4.4 0.1 1.0 CA H:ASP125 4.6 0.7 1.0 C H:LEU114 4.6 0.3 1.0 HB2 H:ASN123 4.7 0.6 1.0 CB H:ASP125 4.7 0.7 1.0 O H:GLU121 4.8 0.5 1.0 O H:SER113 4.8 0.4 1.0 HA H:VAL119 4.9 0.3 1.0 CB H:ASP117 4.9 0.5 1.0 O H:SER122 4.9 0.4 1.0 CA H:LEU114 4.9 0.3 1.0 HG13 H:VAL119 4.9 0.3 1.0 HA H:ASP124 5.0 0.3 1.0 HA H:ASN123 5.0 0.6 1.0

Calcium binding site 9 out of 25 in the Structure of the Pulg Pseudopilus


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 9 of Structure of the Pulg Pseudopilus within 5.0Å range: probe atom residue distance (Å) B Occ I:Ca201 b:0.8 occ:1.00 OG I:SER122 2.4 0.4 1.0 O I:VAL119 2.4 0.3 1.0 H I:ASN123 2.5 0.6 1.0 N I:SER122 2.7 0.4 1.0 OD2 I:ASP117 2.7 0.5 1.0 H I:ASP124 2.8 0.3 1.0 HB I:VAL119 3.1 0.3 1.0 N I:ASN123 3.2 0.6 1.0 C I:VAL119 3.2 0.3 1.0 CB I:SER122 3.2 0.4 1.0 H I:GLU121 3.3 0.5 1.0 CA I:SER122 3.3 0.4 1.0 OD1 I:ASP117 3.4 0.5 1.0 N I:ASP124 3.4 0.3 1.0 CG I:ASP117 3.4 0.5 1.0 HB3 I:SER122 3.4 0.4 1.0 N I:GLU121 3.5 0.5 1.0 HG12 I:VAL119 3.6 0.3 1.0 O I:LEU114 3.6 0.3 1.0 C I:GLU121 3.7 0.5 1.0 C I:SER122 3.7 0.4 1.0 HB2 I:ASP124 3.7 0.3 1.0 CB I:VAL119 3.8 0.3 1.0 H I:VAL119 3.8 0.3 1.0 C I:PRO120 3.8 0.1 1.0 C I:ASP124 3.9 0.3 1.0 CA I:GLU121 3.9 0.5 1.0 HB3 I:ASP125 4.0 0.7 1.0 HA I:GLU121 4.0 0.5 1.0 CA I:VAL119 4.0 0.3 1.0 N I:PRO120 4.0 0.1 1.0 N I:ASP125 4.0 0.7 1.0 HA I:PRO120 4.1 0.1 1.0 CA I:ASP124 4.1 0.3 1.0 CG1 I:VAL119 4.1 0.3 1.0 HB2 I:SER122 4.1 0.4 1.0 O I:ASP124 4.1 0.3 1.0 CA I:PRO120 4.2 0.1 1.0 H I:ASP125 4.2 0.7 1.0 HA I:LEU114 4.2 0.3 1.0 C I:ASN123 4.2 0.6 1.0 HA I:SER122 4.3 0.4 1.0 CA I:ASN123 4.3 0.6 1.0 N I:VAL119 4.3 0.3 1.0 HA I:ASP125 4.3 0.7 1.0 CB I:ASP124 4.4 0.3 1.0 HG11 I:VAL119 4.4 0.3 1.0 O I:PRO120 4.4 0.1 1.0 CA I:ASP125 4.6 0.7 1.0 C I:LEU114 4.6 0.3 1.0 HB2 I:ASN123 4.7 0.6 1.0 CB I:ASP125 4.7 0.7 1.0 O I:GLU121 4.8 0.5 1.0 O I:SER113 4.8 0.4 1.0 HA I:VAL119 4.9 0.3 1.0 CB I:ASP117 4.9 0.5 1.0 O I:SER122 4.9 0.4 1.0 CA I:LEU114 4.9 0.3 1.0 HG13 I:VAL119 4.9 0.3 1.0 HA I:ASP124 5.0 0.3 1.0 HA I:ASN123 5.0 0.6 1.0

Calcium binding site 10 out of 25 in the Structure of the Pulg Pseudopilus


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 10 of Structure of the Pulg Pseudopilus within 5.0Å range: probe atom residue distance (Å) B Occ J:Ca201 b:0.8 occ:1.00 OG J:SER122 2.4 0.4 1.0 O J:VAL119 2.4 0.3 1.0 H J:ASN123 2.5 0.6 1.0 N J:SER122 2.7 0.4 1.0 OD2 J:ASP117 2.7 0.5 1.0 H J:ASP124 2.8 0.3 1.0 HB J:VAL119 3.1 0.3 1.0 N J:ASN123 3.2 0.6 1.0 C J:VAL119 3.2 0.3 1.0 CB J:SER122 3.2 0.4 1.0 H J:GLU121 3.3 0.5 1.0 CA J:SER122 3.3 0.4 1.0 OD1 J:ASP117 3.4 0.5 1.0 N J:ASP124 3.4 0.3 1.0 CG J:ASP117 3.4 0.5 1.0 HB3 J:SER122 3.4 0.4 1.0 N J:GLU121 3.5 0.5 1.0 HG12 J:VAL119 3.6 0.3 1.0 O J:LEU114 3.6 0.3 1.0 C J:GLU121 3.7 0.5 1.0 C J:SER122 3.7 0.4 1.0 HB2 J:ASP124 3.7 0.3 1.0 CB J:VAL119 3.8 0.3 1.0 H J:VAL119 3.8 0.3 1.0 C J:PRO120 3.8 0.1 1.0 C J:ASP124 3.9 0.3 1.0 CA J:GLU121 3.9 0.5 1.0 HB3 J:ASP125 4.0 0.7 1.0 HA J:GLU121 4.0 0.5 1.0 CA J:VAL119 4.0 0.3 1.0 N J:PRO120 4.0 0.1 1.0 N J:ASP125 4.0 0.7 1.0 HA J:PRO120 4.1 0.1 1.0 CA J:ASP124 4.1 0.3 1.0 CG1 J:VAL119 4.1 0.3 1.0 HB2 J:SER122 4.1 0.4 1.0 O J:ASP124 4.1 0.3 1.0 CA J:PRO120 4.2 0.1 1.0 H J:ASP125 4.2 0.7 1.0 HA J:LEU114 4.2 0.3 1.0 C J:ASN123 4.2 0.6 1.0 HA J:SER122 4.3 0.4 1.0 CA J:ASN123 4.3 0.6 1.0 N J:VAL119 4.3 0.3 1.0 HA J:ASP125 4.3 0.7 1.0 CB J:ASP124 4.4 0.3 1.0 HG11 J:VAL119 4.4 0.3 1.0 O J:PRO120 4.4 0.1 1.0 CA J:ASP125 4.6 0.7 1.0 C J:LEU114 4.6 0.3 1.0 HB2 J:ASN123 4.7 0.6 1.0 CB J:ASP125 4.7 0.7 1.0 O J:GLU121 4.8 0.5 1.0 O J:SER113 4.8 0.4 1.0 HA J:VAL119 4.9 0.3 1.0 CB J:ASP117 4.9 0.5 1.0 O J:SER122 4.9 0.4 1.0 CA J:LEU114 4.9 0.3 1.0 HG13 J:VAL119 4.9 0.3 1.0 HA J:ASP124 5.0 0.3 1.0 HA J:ASN123 5.0 0.6 1.0

A.Lopez-Castilla, J.L.Thomassin, B.Bardiaux, W.Zheng, M.Nivaskumar, X.Yu, M.Nilges, E.H.Egelman, N.Izadi-Pruneyre, O.Francetic. Structure of the Calcium-Dependent Type 2 Secretion Pseudopilus. Nat Microbiol V. 2 1686 2017.
ISSN: ESSN 2058-5276
PubMed: 28993624
DOI: 10.1038/S41564-017-0041-2