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Calcium in PDB 5xdw: Staphylococcus Aureus Ftsz 12-316 G196S

Protein crystallography data

The structure of Staphylococcus Aureus Ftsz 12-316 G196S, PDB code: 5xdw was solved by J.Fujita, Y.Maeda, E.Mizohata, T.Inoue, M.Kaul, A.K.Parhi, E.J.Lavoie, D.S.Pilch, H.Matsumura, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 41.31 / 2.00
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 71.764, 51.011, 88.328, 90.00, 110.71, 90.00
R / Rfree (%) 18.8 / 23.6

Calcium Binding Sites:

The binding sites of Calcium atom in the Staphylococcus Aureus Ftsz 12-316 G196S (pdb code 5xdw). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Staphylococcus Aureus Ftsz 12-316 G196S, PDB code: 5xdw:

Calcium binding site 1 out of 1 in 5xdw

Go back to Calcium Binding Sites List in 5xdw
Calcium binding site 1 out of 1 in the Staphylococcus Aureus Ftsz 12-316 G196S


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Staphylococcus Aureus Ftsz 12-316 G196S within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca402

b:29.8
occ:1.00
O A:LEU200 2.3 25.3 1.0
O A:VAL203 2.3 24.0 1.0
O A:LEU209 2.4 16.7 1.0
OD1 A:ASN208 2.4 18.5 1.0
O A:HOH651 2.5 22.5 1.0
CG A:ASN208 3.4 18.1 1.0
C A:LEU200 3.4 26.4 1.0
C A:VAL203 3.5 27.5 1.0
C A:LEU209 3.6 17.9 1.0
ND2 A:ASN208 3.7 18.2 1.0
N A:LEU209 4.0 17.7 1.0
CA A:LEU200 4.2 27.3 1.0
N A:GLY205 4.3 22.6 1.0
CA A:SER204 4.3 27.6 1.0
N A:SER204 4.3 27.3 1.0
CA A:LEU209 4.4 18.1 1.0
N A:VAL203 4.4 28.0 1.0
N A:ILE201 4.4 24.5 1.0
CA A:VAL203 4.4 29.2 1.0
N A:ASP210 4.5 17.8 1.0
CA A:ASP210 4.6 18.8 1.0
CA A:ILE201 4.6 26.5 1.0
O A:HOH584 4.6 13.2 1.0
C A:ILE201 4.6 25.1 1.0
O A:ILE201 4.7 24.4 1.0
CB A:ASN208 4.7 17.7 1.0
O A:HOH638 4.7 29.3 1.0
CB A:LEU200 4.8 29.2 1.0
CB A:VAL203 4.8 31.6 1.0
C A:SER204 4.8 25.7 1.0
C A:ASN208 4.9 17.4 1.0
CA A:ASN208 4.9 17.6 1.0
CB A:ASP210 5.0 20.6 1.0
CB A:LEU209 5.0 19.3 1.0

Reference:

J.Fujita, Y.Maeda, E.Mizohata, T.Inoue, M.Kaul, A.K.Parhi, E.J.Lavoie, D.S.Pilch, H.Matsumura. Structural Flexibility of An Inhibitor Overcomes Drug Resistance Mutations in Staphylococcus Aureus Ftsz Acs Chem. Biol. V. 12 1947 2017.
ISSN: ESSN 1554-8937
PubMed: 28621933
DOI: 10.1021/ACSCHEMBIO.7B00323
Page generated: Mon Jul 15 14:54:45 2024

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