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Calcium in PDB 5y4f: Crystal Structure of Ankb Ankyrin Repeats R13-24 in Complex with Autoinhibition Segment Ai-C

Protein crystallography data

The structure of Crystal Structure of Ankb Ankyrin Repeats R13-24 in Complex with Autoinhibition Segment Ai-C, PDB code: 5y4f was solved by K.Chen, J.Li, C.Wang, Z.Wei, M.Zhang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 38.16 / 1.95
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 29.304, 127.803, 257.550, 90.00, 90.00, 90.00
R / Rfree (%) 18.4 / 22

Calcium Binding Sites:

The binding sites of Calcium atom in the Crystal Structure of Ankb Ankyrin Repeats R13-24 in Complex with Autoinhibition Segment Ai-C (pdb code 5y4f). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Crystal Structure of Ankb Ankyrin Repeats R13-24 in Complex with Autoinhibition Segment Ai-C, PDB code: 5y4f:

Calcium binding site 1 out of 1 in 5y4f

Go back to Calcium Binding Sites List in 5y4f
Calcium binding site 1 out of 1 in the Crystal Structure of Ankb Ankyrin Repeats R13-24 in Complex with Autoinhibition Segment Ai-C


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of Ankb Ankyrin Repeats R13-24 in Complex with Autoinhibition Segment Ai-C within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Ca901

b:42.1
occ:1.00
O B:HOH1093 2.3 39.2 1.0
O B:HOH1089 2.3 44.5 1.0
O B:GLY441 2.5 29.5 1.0
C B:GLY441 3.6 32.2 1.0
CA B:GLY441 4.3 33.7 1.0
N B:HIS442 4.6 29.5 1.0
N B:LEU443 4.6 24.2 1.0
CA B:HIS442 4.8 28.1 1.0
O B:HOH1114 5.0 34.6 1.0

Reference:

K.Chen, J.Li, C.Wang, Z.Wei, M.Zhang. Autoinhibition of Ankyrin-B/G Membrane Target Bindings By Intrinsically Disordered Segments From the Tail Regions. Elife V. 6 2017.
ISSN: ESSN 2050-084X
PubMed: 28841137
DOI: 10.7554/ELIFE.29150
Page generated: Wed Jul 9 11:53:40 2025

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