Calcium in PDB 6c6g: An Unexpected Vestigial Protein Complex Reveals the Evolutionary Origins of An S-Triazine Catabolic Enzyme. Inhibitor Bound Complex.

Enzymatic activity of An Unexpected Vestigial Protein Complex Reveals the Evolutionary Origins of An S-Triazine Catabolic Enzyme. Inhibitor Bound Complex.

All present enzymatic activity of An Unexpected Vestigial Protein Complex Reveals the Evolutionary Origins of An S-Triazine Catabolic Enzyme. Inhibitor Bound Complex.:
3.5.1.84;

Protein crystallography data

The structure of An Unexpected Vestigial Protein Complex Reveals the Evolutionary Origins of An S-Triazine Catabolic Enzyme. Inhibitor Bound Complex., PDB code: 6c6g was solved by T.S.Peat, L.Esquirol, M.Wilding, J.W.Liu, N.G.French, C.J.Hartley, O.Hideki, C.J.Easton, J.Newman, C.Scott, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

*Resolution Low / High (Å)*	74.91 / 2.10
*Space group*	I 1 2 1
*Cell size a, b, c (Å), α, β, γ (°)*	78.629, 88.909, 141.852, 90.00, 101.32, 90.00
*R / R_free (%)*	16.6 / 21

Calcium Binding Sites:

The binding sites of Calcium atom in the An Unexpected Vestigial Protein Complex Reveals the Evolutionary Origins of An S-Triazine Catabolic Enzyme. Inhibitor Bound Complex. (pdb code 6c6g). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the An Unexpected Vestigial Protein Complex Reveals the Evolutionary Origins of An S-Triazine Catabolic Enzyme. Inhibitor Bound Complex., PDB code: 6c6g:
Jump to Calcium binding site number: 1; 2;

Calcium binding site 1 out of 2 in 6c6g

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Calcium Binding Sites List in 6c6g

Calcium binding site 1 out of 2 in the An Unexpected Vestigial Protein Complex Reveals the Evolutionary Origins of An S-Triazine Catabolic Enzyme. Inhibitor Bound Complex.

Mono view

Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of An Unexpected Vestigial Protein Complex Reveals the Evolutionary Origins of An S-Triazine Catabolic Enzyme. Inhibitor Bound Complex. within 5.0Å range:

probe	atom	residue	distance (Å)	B	Occ
A:Ca501 b:17.9 occ:1.00	O	A:HOH824	3.1	20.8	1.0
	ND2	A:ASN172	3.2	10.1	1.0
	O	A:HOH797	3.2	10.9	1.0
	O2	A:SVV174	3.3	12.4	1.0
	CD1	A:TYR125	3.6	8.9	1.0
	CE1	A:TYR125	3.8	8.9	1.0
	CE2	A:PHE202	3.8	11.0	1.0
	CZ	A:PHE202	4.0	10.9	1.0
	CB	A:ASN172	4.1	10.3	1.0
	CG	A:ASN172	4.1	10.8	1.0
	CG2	A:THR305	4.1	10.1	1.0
	CZ	A:PHE127	4.2	11.8	1.0
	O	A:HOH745	4.2	12.2	1.0
	CE2	A:PHE127	4.4	11.7	1.0
	P1	A:SVV174	4.4	12.0	1.0
	N	A:GLY126	4.6	10.5	1.0
	O	A:ALA124	4.8	9.4	1.0
	O3	A:SVV174	4.8	12.8	1.0
	N4	A:SVV174	4.8	12.9	1.0
	CE1	A:PHE127	4.8	11.7	1.0
	CA	A:TYR125	4.9	9.7	1.0
	CG	A:TYR125	4.9	9.2	1.0

Calcium binding site 2 out of 2 in 6c6g

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Calcium Binding Sites List in 6c6g

Calcium binding site 2 out of 2 in the An Unexpected Vestigial Protein Complex Reveals the Evolutionary Origins of An S-Triazine Catabolic Enzyme. Inhibitor Bound Complex.

Mono view

Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of An Unexpected Vestigial Protein Complex Reveals the Evolutionary Origins of An S-Triazine Catabolic Enzyme. Inhibitor Bound Complex. within 5.0Å range:

probe	atom	residue	distance (Å)	B	Occ
B:Ca501 b:16.9 occ:1.00	ND2	B:ASN172	3.2	7.5	1.0
	O2	B:SVV174	3.2	13.5	1.0
	O	B:HOH820	3.2	15.9	1.0
	O	B:HOH812	3.3	11.0	1.0
	CD1	B:TYR125	3.7	11.2	1.0
	CE1	B:TYR125	3.8	11.1	1.0
	CE2	B:PHE202	3.9	11.0	1.0
	CB	B:ASN172	4.0	8.6	1.0
	CG	B:ASN172	4.1	8.5	1.0
	CZ	B:PHE202	4.1	11.2	1.0
	CZ	B:PHE127	4.1	9.9	1.0
	CG2	B:THR305	4.2	9.7	1.0
	CE2	B:PHE127	4.3	10.3	1.0
	O	B:HOH730	4.3	13.9	1.0
	P1	B:SVV174	4.4	12.7	1.0
	N	B:GLY126	4.6	11.2	1.0
	N4	B:SVV174	4.7	11.8	1.0
	CE1	B:PHE127	4.8	10.3	1.0
	O3	B:SVV174	4.8	11.0	1.0
	O	B:ALA124	4.8	8.9	1.0
	CA	B:TYR125	4.9	11.2	1.0
	CG	B:TYR125	5.0	11.8	1.0
	CD2	B:PHE127	5.0	10.2	1.0

Reference:

L.Esquirol, T.S.Peat, M.Wilding, J.W.Liu, N.G.French, C.J.Hartley, H.Onagi, T.Nebl, C.J.Easton, J.Newman, C.Scott. An Unexpected Vestigial Protein Complex Reveals the Evolutionary Origins of Ans-Triazine Catabolic Enzyme. J. Biol. Chem. V. 293 7880 2018.
ISSN: ESSN 1083-351X
PubMed: 29523689
DOI: 10.1074/JBC.RA118.001996

Page generated: Wed Jul 9 13:02:02 2025

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