Calcium in PDB 6dnf: Cryo-Em Structure of the Mitochondrial Calcium Uniporter Mcu From the Fungus Cyphellophora Europaea

The binding sites of Calcium atom in the Cryo-Em Structure of the Mitochondrial Calcium Uniporter Mcu From the Fungus Cyphellophora Europaea (pdb code 6dnf). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 3 binding sites of Calcium where determined in the Cryo-Em Structure of the Mitochondrial Calcium Uniporter Mcu From the Fungus Cyphellophora Europaea, PDB code: 6dnf:
Jump to Calcium binding site number: 1; 2; 3;

Calcium binding site 1 out of 3 in the Cryo-Em Structure of the Mitochondrial Calcium Uniporter Mcu From the Fungus Cyphellophora Europaea


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Cryo-Em Structure of the Mitochondrial Calcium Uniporter Mcu From the Fungus Cyphellophora Europaea within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca402 b:89.7 occ:1.00 OD1 B:ASP225 3.8 0.1 1.0 OD1 D:ASP225 3.8 0.1 1.0 OD1 C:ASP225 3.8 0.3 1.0 OD1 A:ASP225 3.8 0.4 1.0 CG D:ASP225 4.7 0.1 1.0 CG B:ASP225 4.8 0.1 1.0 CG C:ASP225 4.8 0.3 1.0 CG A:ASP225 4.8 0.4 1.0

Calcium binding site 2 out of 3 in the Cryo-Em Structure of the Mitochondrial Calcium Uniporter Mcu From the Fungus Cyphellophora Europaea


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Cryo-Em Structure of the Mitochondrial Calcium Uniporter Mcu From the Fungus Cyphellophora Europaea within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca403 b:0.8 occ:1.00 OE2 B:GLU228 2.3 0.1 1.0 OE2 A:GLU228 2.4 0.6 1.0 OE2 C:GLU228 2.4 0.1 1.0 OE2 D:GLU228 2.4 0.4 1.0 OE1 C:GLU228 2.7 0.1 1.0 OE1 A:GLU228 2.7 0.6 1.0 CD A:GLU228 2.8 0.6 1.0 CD C:GLU228 2.8 0.1 1.0 CD B:GLU228 2.9 0.1 1.0 OE1 B:GLU228 3.0 0.1 1.0 CD D:GLU228 3.0 0.4 1.0 OE1 D:GLU228 3.0 0.4 1.0 HE1 C:TRP224 3.6 0.8 1.0 HE1 A:TRP224 3.6 0.1 1.0 HE1 B:TRP224 3.7 0.3 1.0 HE1 D:TRP224 3.7 0.7 1.0 CG C:GLU228 4.3 0.1 1.0 CG A:GLU228 4.3 0.6 1.0 CG D:GLU228 4.3 0.4 1.0 CG B:GLU228 4.3 0.1 1.0 HG3 D:GLU228 4.4 0.4 1.0 HG3 C:GLU228 4.4 0.1 1.0 HG3 A:GLU228 4.4 0.6 1.0 NE1 C:TRP224 4.4 0.8 1.0 NE1 A:TRP224 4.4 0.1 1.0 HG3 B:GLU228 4.5 0.1 1.0 NE1 B:TRP224 4.5 0.3 1.0 NE1 D:TRP224 4.5 0.7 1.0 HG2 C:GLU228 4.7 0.1 1.0 HG2 A:GLU228 4.7 0.6 1.0 HG2 B:GLU228 4.7 0.1 1.0 HG2 D:GLU228 4.7 0.4 1.0

Calcium binding site 3 out of 3 in the Cryo-Em Structure of the Mitochondrial Calcium Uniporter Mcu From the Fungus Cyphellophora Europaea


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 3 of Cryo-Em Structure of the Mitochondrial Calcium Uniporter Mcu From the Fungus Cyphellophora Europaea within 5.0Å range:

R.Baradaran, C.Wang, A.F.Siliciano, S.B.Long. Cryo-Em Structures of Fungal and Metazoan Mitochondrial Calcium Uniporters. Nature V. 559 580 2018.
ISSN: ESSN 1476-4687
PubMed: 29995857
DOI: 10.1038/S41586-018-0331-8