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Calcium in PDB 6fat: The Crystal Structure of A Feruloyl Esterase C From Fusarium Oxysporum.

Protein crystallography data

The structure of The Crystal Structure of A Feruloyl Esterase C From Fusarium Oxysporum., PDB code: 6fat was solved by M.Dimarogona, E.D.Chrysina, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 102.35 / 2.30
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 67.536, 87.467, 106.565, 90.00, 106.18, 90.00
R / Rfree (%) 20.7 / 23.5

Calcium Binding Sites:

The binding sites of Calcium atom in the The Crystal Structure of A Feruloyl Esterase C From Fusarium Oxysporum. (pdb code 6fat). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the The Crystal Structure of A Feruloyl Esterase C From Fusarium Oxysporum., PDB code: 6fat:
Jump to Calcium binding site number: 1; 2;

Calcium binding site 1 out of 2 in 6fat

Go back to Calcium Binding Sites List in 6fat
Calcium binding site 1 out of 2 in the The Crystal Structure of A Feruloyl Esterase C From Fusarium Oxysporum.


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of The Crystal Structure of A Feruloyl Esterase C From Fusarium Oxysporum. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca613

b:33.5
occ:1.00
OD1 A:ASP270 2.3 33.9 1.0
O A:ILE280 2.3 32.8 1.0
OD1 A:ASP278 2.3 34.5 1.0
OD1 A:ASP274 2.3 33.5 1.0
O A:VAL276 2.3 34.5 1.0
O A:HOH745 2.5 27.9 1.0
CG A:ASP274 3.0 34.0 1.0
OD2 A:ASP274 3.0 34.4 1.0
CG A:ASP278 3.4 34.8 1.0
CG A:ASP270 3.4 34.2 1.0
C A:ILE280 3.5 32.4 1.0
C A:VAL276 3.5 35.1 1.0
OD2 A:ASP278 3.8 34.6 1.0
OD2 A:ASP270 3.9 34.0 1.0
CB A:VAL276 4.1 35.1 1.0
N A:ASP278 4.1 34.9 1.0
N A:ILE280 4.1 32.9 1.0
O A:ASP270 4.2 35.0 1.0
CA A:VAL276 4.2 34.9 1.0
CA A:ILE280 4.3 32.9 1.0
CB A:ASP274 4.4 34.0 1.0
N A:VAL276 4.5 34.6 1.0
C A:ASP270 4.5 35.2 1.0
N A:LEU281 4.5 31.9 1.0
CB A:ILE280 4.5 33.1 1.0
N A:ALA277 4.6 35.4 1.0
CG1 A:VAL276 4.6 35.2 1.0
CB A:ASP278 4.6 34.7 1.0
CB A:ASP270 4.6 34.3 1.0
CA A:ASP270 4.7 34.7 1.0
CA A:LEU281 4.7 31.5 1.0
N A:GLU282 4.8 30.7 1.0
CA A:ASP278 4.8 34.5 1.0
CA A:ALA277 4.8 35.5 1.0
N A:GLY279 4.9 33.8 1.0

Calcium binding site 2 out of 2 in 6fat

Go back to Calcium Binding Sites List in 6fat
Calcium binding site 2 out of 2 in the The Crystal Structure of A Feruloyl Esterase C From Fusarium Oxysporum.


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of The Crystal Structure of A Feruloyl Esterase C From Fusarium Oxysporum. within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Ca622

b:30.2
occ:1.00
OD1 B:ASP270 2.3 31.1 1.0
OD1 B:ASP278 2.3 30.7 1.0
OD1 B:ASP274 2.3 30.2 1.0
O B:ILE280 2.3 30.8 1.0
O B:VAL276 2.3 30.5 1.0
O B:HOH799 2.4 25.7 1.0
CG B:ASP274 3.0 30.4 1.0
OD2 B:ASP274 3.0 30.6 1.0
CG B:ASP278 3.3 30.7 1.0
CG B:ASP270 3.4 31.0 1.0
C B:VAL276 3.5 30.6 1.0
C B:ILE280 3.5 31.5 1.0
OD2 B:ASP278 3.7 30.3 1.0
OD2 B:ASP270 3.9 30.5 1.0
CB B:VAL276 4.0 30.8 1.0
O B:ASP270 4.1 32.2 1.0
N B:ASP278 4.2 31.1 1.0
CA B:VAL276 4.2 30.6 1.0
N B:ILE280 4.2 31.4 1.0
CA B:ILE280 4.3 31.5 1.0
C B:ASP270 4.4 32.2 1.0
N B:VAL276 4.4 30.7 1.0
CB B:ASP274 4.4 30.4 1.0
CG1 B:VAL276 4.5 30.8 1.0
CB B:ILE280 4.5 31.8 1.0
N B:LEU281 4.5 31.6 1.0
CB B:ASP278 4.6 30.7 1.0
N B:ALA277 4.6 30.8 1.0
CB B:ASP270 4.6 31.1 1.0
CA B:ASP270 4.6 31.4 1.0
CA B:LEU281 4.7 31.7 1.0
N B:GLU282 4.8 31.5 1.0
CA B:ASP278 4.8 30.9 1.0
CA B:ALA277 4.9 31.0 1.0
OE2 B:GLU282 4.9 31.6 1.0

Reference:

M.Dimarogona, E.D.Chrysina. The Crystal Structure of A Feruloyl Esterase C From Fusarium Oxysporum. To Be Published.
Page generated: Tue Jul 16 07:41:34 2024

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