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Calcium in PDB 6fuy: Crystal Structure of Human Full-Length Vinculin-T12-A974K (Residues 1- 1066)

Protein crystallography data

The structure of Crystal Structure of Human Full-Length Vinculin-T12-A974K (Residues 1- 1066), PDB code: 6fuy was solved by D.S.Chorev, T.Volberg, A.Livne, M.Eisenstein, B.Martins, Z.Kam, B.M.Jockusch, O.Medalia, M.Sharon, B.Geiger, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.91 / 3.00
Space group P 31 2 1
Cell size a, b, c (Å), α, β, γ (°) 97.810, 97.810, 233.770, 90.00, 90.00, 120.00
R / Rfree (%) 26.5 / 30.5

Calcium Binding Sites:

The binding sites of Calcium atom in the Crystal Structure of Human Full-Length Vinculin-T12-A974K (Residues 1- 1066) (pdb code 6fuy). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Crystal Structure of Human Full-Length Vinculin-T12-A974K (Residues 1- 1066), PDB code: 6fuy:

Calcium binding site 1 out of 1 in 6fuy

Go back to Calcium Binding Sites List in 6fuy
Calcium binding site 1 out of 1 in the Crystal Structure of Human Full-Length Vinculin-T12-A974K (Residues 1- 1066)


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of Human Full-Length Vinculin-T12-A974K (Residues 1- 1066) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca1101

b:0.7
occ:1.00
OD1 A:ASP800 3.5 91.5 1.0
OD2 A:ASP800 3.6 89.5 1.0
CE A:MET799 3.8 0.2 1.0
CG A:ASP800 4.0 82.0 1.0
CB A:PRO796 4.8 73.2 1.0

Reference:

D.S.Chorev, T.Volberg, A.Livne, M.Eisenstein, B.Martins, Z.Kam, B.M.Jockusch, O.Medalia, M.Sharon, B.Geiger. Conformational States During Vinculin Unlocking Differentially Regulate Focal Adhesion Properties. Sci Rep V. 8 2693 2018.
ISSN: ESSN 2045-2322
PubMed: 29426917
DOI: 10.1038/S41598-018-21006-8
Page generated: Wed Jul 9 14:17:52 2025

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