Calcium in PDB 6h2m: Long Wavelength Mesh&Collect Native Sad Phasing on Microcrystals

The structure of Long Wavelength Mesh&Collect Native Sad Phasing on Microcrystals, PDB code: 6h2m was solved by M.Cianci, M.Nanao, T.R.Schneider, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	44.43 / 1.93
Space group	I 2 2 2
Cell size a, b, c (Å), α, β, γ (°)	61.630, 85.670, 88.860, 90.00, 90.00, 90.00
R / Rfree (%)	14.7 / 17.7

The structure of Long Wavelength Mesh&Collect Native Sad Phasing on Microcrystals also contains other interesting chemical elements:

Manganese

(Mn)

1 atom

The binding sites of Calcium atom in the Long Wavelength Mesh&Collect Native Sad Phasing on Microcrystals (pdb code 6h2m). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Long Wavelength Mesh&Collect Native Sad Phasing on Microcrystals, PDB code: 6h2m:

Calcium binding site 1 out of 1 in the Long Wavelength Mesh&Collect Native Sad Phasing on Microcrystals


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Long Wavelength Mesh&Collect Native Sad Phasing on Microcrystals within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca302 b:14.1 occ:1.00 O A:TYR12 2.3 15.3 1.0 OD2 A:ASP19 2.4 14.6 1.0 OD1 A:ASP10 2.4 12.4 1.0 OD2 A:ASP10 2.4 11.9 1.0 OD1 A:ASN14 2.4 13.9 1.0 O A:HOH476 2.5 17.1 1.0 O A:HOH475 2.5 13.3 1.0 CG A:ASP10 2.8 13.6 1.0 CG A:ASP19 3.5 13.2 1.0 C A:TYR12 3.6 12.3 1.0 CG A:ASN14 3.6 17.8 1.0 N A:ASN14 4.0 14.3 1.0 OD1 A:ASP19 4.0 14.2 1.0 MN A:MN301 4.2 29.6 1.0 CB A:ASN14 4.3 15.7 1.0 CB A:ASP10 4.3 12.5 1.0 CA A:TYR12 4.4 12.6 1.0 N A:TYR12 4.4 13.3 1.0 O A:HOH431 4.5 14.3 1.0 N A:PRO13 4.5 19.1 1.0 CA A:PRO13 4.6 18.0 1.0 CE1 A:HIS24 4.6 16.3 1.0 CB A:TYR12 4.6 12.5 1.0 ND2 A:ASN14 4.6 14.8 1.0 C A:PRO13 4.6 17.3 1.0 O A:ASP208 4.6 10.9 1.0 CB A:ASP19 4.7 13.0 1.0 CB A:ARG228 4.7 10.9 1.0 CA A:ASN14 4.8 14.8 1.0 OD2 A:ASP208 4.8 14.8 1.0 O A:ARG228 4.8 13.9 1.0 CA A:ARG228 4.9 12.7 1.0 NE2 A:HIS24 4.9 11.8 1.0

M.Cianci, M.Nanao, T.R.Schneider. Long-Wavelength Mesh&Collect Native Sad Phasing From Microcrystals. Acta Crystallogr D Struct V. 75 192 2019BIOL.
ISSN: ISSN 2059-7983
PubMed: 30821707
DOI: 10.1107/S2059798319002031