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Calcium in PDB 6ioz: Structural Insights of Idursulfase Beta

Enzymatic activity of Structural Insights of Idursulfase Beta

All present enzymatic activity of Structural Insights of Idursulfase Beta:
3.1.6.13;

Protein crystallography data

The structure of Structural Insights of Idursulfase Beta, PDB code: 6ioz was solved by H.Kim, D.Kim, J.Hong, K.Lee, J.Seo, B.H.Oh, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 47.62 / 3.10
Space group P 31 1 2
Cell size a, b, c (Å), α, β, γ (°) 70.825, 70.825, 285.697, 90.00, 90.00, 120.00
R / Rfree (%) 19.7 / 24.3

Calcium Binding Sites:

The binding sites of Calcium atom in the Structural Insights of Idursulfase Beta (pdb code 6ioz). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Structural Insights of Idursulfase Beta, PDB code: 6ioz:

Calcium binding site 1 out of 1 in 6ioz

Go back to Calcium Binding Sites List in 6ioz
Calcium binding site 1 out of 1 in the Structural Insights of Idursulfase Beta


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Structural Insights of Idursulfase Beta within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca1000

b:65.1
occ:1.00
NE2 A:HIS335 2.2 69.2 1.0
OS1 A:ALS84 2.3 62.0 1.0
OD2 A:ASP334 2.3 47.2 1.0
OD1 A:ASP46 2.3 53.4 1.0
OD1 A:ASP45 2.4 71.9 1.0
OS3 A:ALS84 2.4 76.7 1.0
S A:ALS84 2.9 78.0 1.0
CE1 A:HIS335 3.0 68.4 1.0
CD2 A:HIS335 3.1 64.2 1.0
CG A:ASP334 3.2 64.2 1.0
HE1 A:HIS335 3.2 82.1 1.0
OD1 A:ASP334 3.3 60.1 1.0
CG A:ASP45 3.4 59.7 1.0
HD2 A:HIS335 3.4 77.0 1.0
HD2 A:HIS229 3.4 85.5 1.0
CG A:ASP46 3.4 48.2 1.0
CB A:ALS84 3.5 54.1 1.0
H A:ASP46 3.6 64.3 1.0
HE3 A:LYS347 3.7 80.0 1.0
CA A:ALS84 3.8 49.9 1.0
HH21 A:ARG88 3.8 67.8 1.0
HZ3 A:LYS135 3.9 61.1 1.0
OD2 A:ASP45 3.9 53.0 1.0
HE A:ARG88 3.9 57.9 1.0
OS2 A:ALS84 3.9 74.7 1.0
OS4 A:ALS84 3.9 74.7 1.0
N A:ASP46 4.0 53.6 1.0
OD2 A:ASP46 4.0 52.7 1.0
HA A:ASP45 4.0 63.9 1.0
N A:ALS84 4.0 47.1 1.0
ND1 A:HIS335 4.0 50.5 1.0
HZ2 A:LYS347 4.0 67.3 1.0
CG A:HIS335 4.1 57.7 1.0
HZ1 A:LYS135 4.1 61.1 1.0
OG A:ALS84 4.2 51.4 1.0
HZ1 A:LYS347 4.2 67.3 1.0
CD2 A:HIS229 4.3 71.3 1.0
HA A:ASP46 4.3 71.3 1.0
NZ A:LYS347 4.4 56.1 1.0
NZ A:LYS135 4.4 50.9 1.0
CE A:LYS347 4.5 66.7 1.0
CA A:ASP46 4.5 59.4 1.0
CB A:ASP45 4.6 48.1 1.0
CB A:ASP334 4.6 63.0 1.0
CA A:ASP45 4.6 53.2 1.0
CB A:ASP46 4.6 50.2 1.0
C A:ASP45 4.6 50.4 1.0
HB2 A:ASP334 4.6 75.5 1.0
HA A:VAL83 4.7 84.8 1.0
NH2 A:ARG88 4.7 56.5 1.0
HE2 A:LYS135 4.7 44.4 1.0
NE A:ARG88 4.7 48.2 1.0
HD1 A:HIS335 4.8 60.6 1.0
C A:VAL83 4.8 67.9 1.0
NE2 A:HIS229 5.0 57.8 1.0

Reference:

H.Kim, D.Kim, J.Hong, K.Lee, J.Seo, B.H.Oh. Structural Insights of Idursulfase Beta To Be Published.
Page generated: Tue Jul 16 09:32:18 2024

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