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Calcium in PDB 6j03: Crystal Structure of A Cyclase Mutant in Apo Form

Protein crystallography data

The structure of Crystal Structure of A Cyclase Mutant in Apo Form, PDB code: 6j03 was solved by X.K.Tang, W.D.Liu, C.C.Chen, R.T.Guo, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 24.12 / 1.48
Space group P 31 2 1
Cell size a, b, c (Å), α, β, γ (°) 54.779, 54.779, 152.416, 90.00, 90.00, 120.00
R / Rfree (%) 10.9 / 14

Calcium Binding Sites:

The binding sites of Calcium atom in the Crystal Structure of A Cyclase Mutant in Apo Form (pdb code 6j03). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Crystal Structure of A Cyclase Mutant in Apo Form, PDB code: 6j03:

Calcium binding site 1 out of 1 in 6j03

Go back to Calcium Binding Sites List in 6j03
Calcium binding site 1 out of 1 in the Crystal Structure of A Cyclase Mutant in Apo Form


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of A Cyclase Mutant in Apo Form within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca302

b:13.1
occ:1.00
O A:GLU95 2.3 14.2 1.0
O A:ASN98 2.3 12.2 1.0
OE1 A:GLU95 2.4 14.1 1.0
OE2 A:GLU39 2.4 12.3 1.0
OD1 A:ASP216 2.4 13.0 1.0
O A:GLY37 2.4 12.1 1.0
OD2 A:ASP216 2.7 14.8 1.0
CG A:ASP216 2.9 13.0 1.0
C A:GLU95 3.3 13.9 1.0
C A:GLY37 3.4 11.9 1.0
CD A:GLU39 3.5 13.1 1.0
C A:ASN98 3.5 11.6 1.0
CD A:GLU95 3.5 16.5 1.0
CA A:GLY37 3.8 13.1 1.0
N A:ASN98 3.9 12.4 1.0
CB A:GLU95 4.0 18.3 1.0
CG A:GLU39 4.0 13.3 1.0
CA A:GLU95 4.1 14.6 1.0
CA A:ASN98 4.2 12.5 1.0
N A:GLY96 4.3 14.7 1.0
N A:GLU95 4.3 14.6 1.0
CG A:GLU95 4.3 20.7 1.0
CB A:ASP216 4.4 13.5 1.0
CA A:GLY96 4.4 15.1 1.0
OE2 A:GLU95 4.4 19.8 1.0
OE1 A:GLU39 4.5 14.1 1.0
N A:ILE99 4.6 11.6 1.0
C A:GLY96 4.6 13.9 1.0
N A:ARG97 4.6 12.4 1.0
N A:PHE38 4.6 11.6 1.0
CB A:ASN98 4.7 12.9 1.0
CB A:ALA93 4.7 15.4 1.0
CA A:ILE99 4.8 11.9 1.0
C A:PHE38 4.9 12.0 1.0
N A:GLU39 4.9 11.7 1.0
C A:ARG97 4.9 13.6 1.0
N A:ASN217 4.9 12.2 1.0

Reference:

X.K.Tang, W.D.Liu, C.C.Chen, R.T.Guo. Crystal Structure of A Cyclase Mutant in Apo Form To Be Published.
Page generated: Wed Jul 9 15:03:01 2025

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