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Calcium in PDB 6m7e: Structure of Bovine Lactoperoxidase with Multiple Iodide Ions in the Distaline Heme Cavity.

Enzymatic activity of Structure of Bovine Lactoperoxidase with Multiple Iodide Ions in the Distaline Heme Cavity.

All present enzymatic activity of Structure of Bovine Lactoperoxidase with Multiple Iodide Ions in the Distaline Heme Cavity.:
1.11.1.7;

Protein crystallography data

The structure of Structure of Bovine Lactoperoxidase with Multiple Iodide Ions in the Distaline Heme Cavity., PDB code: 6m7e was solved by A.Maurya, V.Viswanathan, N.Pandey, A.K.Singh, M.Sinha, P.Kaur, S.Sharma, T.P.Singh, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 43.95 / 2.42
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 53.810, 80.673, 74.442, 90.00, 103.07, 90.00
R / Rfree (%) 18.4 / 26.9

Other elements in 6m7e:

The structure of Structure of Bovine Lactoperoxidase with Multiple Iodide Ions in the Distaline Heme Cavity. also contains other interesting chemical elements:

Iodine (I) 16 atoms
Iron (Fe) 1 atom
Chlorine (Cl) 1 atom

Calcium Binding Sites:

The binding sites of Calcium atom in the Structure of Bovine Lactoperoxidase with Multiple Iodide Ions in the Distaline Heme Cavity. (pdb code 6m7e). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Structure of Bovine Lactoperoxidase with Multiple Iodide Ions in the Distaline Heme Cavity., PDB code: 6m7e:

Calcium binding site 1 out of 1 in 6m7e

Go back to Calcium Binding Sites List in 6m7e
Calcium binding site 1 out of 1 in the Structure of Bovine Lactoperoxidase with Multiple Iodide Ions in the Distaline Heme Cavity.


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Structure of Bovine Lactoperoxidase with Multiple Iodide Ions in the Distaline Heme Cavity. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca601

b:43.0
occ:1.00
 OG1 A:THR184 2.2 40.6 1.0
O A:PHE186 2.3 40.1 1.0
OD1 A:ASP110 2.3 54.6 1.0
O A:THR184 2.4 39.9 1.0
O A:ASP110 2.4 39.3 1.0
OG A:SER190 2.4 43.7 1.0
OD1 A:ASP188 2.5 44.0 1.0
CG A:ASP188 3.1 46.8 1.0
OD2 A:ASP188 3.3 51.9 1.0
C A:THR184 3.4 41.1 1.0
CG A:ASP110 3.4 47.2 1.0
CB A:SER190 3.4 44.2 1.0
C A:ASP110 3.4 40.0 1.0
CB A:THR184 3.5 37.9 1.0
C A:PHE186 3.5 42.7 1.0
CA A:THR184 3.9 38.0 1.0
N A:ASP188 4.1 48.3 1.0
N A:THR184 4.1 36.6 1.0
CA A:ASP110 4.1 41.1 1.0
N A:PHE186 4.1 45.0 1.0
OD2 A:ASP110 4.3 55.4 1.0
N A:SER190 4.3 44.3 1.0
CB A:ASP110 4.3 41.9 1.0
CA A:PHE186 4.4 45.7 1.0
CB A:ASP188 4.4 45.6 1.0
N A:LEU111 4.4 38.7 1.0
N A:LEU187 4.4 42.0 1.0
CA A:SER190 4.5 41.6 1.0
N A:SER185 4.5 43.8 1.0
C A:SER185 4.5 44.1 1.0
CG2 A:THR184 4.6 39.7 1.0
CA A:LEU187 4.6 41.6 1.0
O A:HOH744 4.6 34.0 1.0
CA A:LEU111 4.6 38.5 1.0
CA A:ASP188 4.8 46.5 1.0
C A:LEU187 4.9 47.9 1.0
CG2 A:VAL183 4.9 43.4 1.0
N A:ALA189 4.9 49.7 1.0
CA A:SER185 5.0 42.0 1.0
CD2 A:LEU111 5.0 40.6 1.0

Reference:

A.Maurya, V.Viswanathan, N.Pandey, A.K.Singh, M.Sinha, P.Kaur, S.Sharma, T.P.Singh. Structure of Bovine Lactoperoxidase with Multiple Iodide Ions in the Distaline Heme Cavity. To Be Published.
Page generated: Tue Jul 16 11:14:37 2024

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