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Calcium in PDB 6muy: Fluoroacetate Dehalogenase, Room Temperature Structure Solved By Serial 3 Degree Oscillation Crystallography

Enzymatic activity of Fluoroacetate Dehalogenase, Room Temperature Structure Solved By Serial 3 Degree Oscillation Crystallography

All present enzymatic activity of Fluoroacetate Dehalogenase, Room Temperature Structure Solved By Serial 3 Degree Oscillation Crystallography:
3.8.1.3;

Protein crystallography data

The structure of Fluoroacetate Dehalogenase, Room Temperature Structure Solved By Serial 3 Degree Oscillation Crystallography, PDB code: 6muy was solved by A.D.Finke, J.L.Wierman, O.Pare-Labrosse, A.Sarrachini, J.Besaw, P.Mehrabi, S.M.Gruner, R.J.D.Miller, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 39.55 / 1.80
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 41.600, 79.100, 83.800, 90.00, 103.00, 90.00
R / Rfree (%) 16.3 / 19.9

Calcium Binding Sites:

The binding sites of Calcium atom in the Fluoroacetate Dehalogenase, Room Temperature Structure Solved By Serial 3 Degree Oscillation Crystallography (pdb code 6muy). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Fluoroacetate Dehalogenase, Room Temperature Structure Solved By Serial 3 Degree Oscillation Crystallography, PDB code: 6muy:

Calcium binding site 1 out of 1 in 6muy

Go back to Calcium Binding Sites List in 6muy
Calcium binding site 1 out of 1 in the Fluoroacetate Dehalogenase, Room Temperature Structure Solved By Serial 3 Degree Oscillation Crystallography


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Fluoroacetate Dehalogenase, Room Temperature Structure Solved By Serial 3 Degree Oscillation Crystallography within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Ca401

b:64.6
occ:1.00
 OD2 B:ASP173 2.4 44.5 1.0
O A:HOH402 2.8 64.6 1.0
O A:HOH415 3.0 47.1 1.0
CG B:ASP173 3.2 43.5 1.0
OD1 B:ASP173 3.9 42.4 1.0
CB B:ASP173 4.1 40.5 1.0
OD1 A:ASN168 4.3 34.9 1.0
CG A:ASN168 4.4 37.0 1.0
O A:HOH509 4.6 46.9 1.0
CB A:ASN168 4.7 27.5 1.0
ND2 A:ASN168 4.8 33.7 1.0
O A:ASN168 5.0 31.9 1.0
O B:GLY172 5.0 57.2 1.0

Reference:

J.L.Wierman, O.Pare-Labrosse, A.Sarracini, J.E.Besaw, M.J.Cook, S.Oghbaey, H.Daoud, P.Mehrabi, I.Kriksunov, A.Kuo, D.J.Schuller, S.Smith, O.P.Ernst, D.M.E.Szebenyi, S.M.Gruner, R.J.D.Miller, A.D.Finke. Fixed-Target Serial Oscillation Crystallography at Room Temperature. Iucrj V. 6 305 2019.
ISSN: ESSN 2052-2525
PubMed: 30867928
DOI: 10.1107/S2052252519001453
Page generated: Tue Jul 16 11:27:57 2024

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