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Calcium in PDB 6nas: Ternary Complex of Ac-Alpha-Actin with Profilin and Accoa-NAA80

Protein crystallography data

The structure of Ternary Complex of Ac-Alpha-Actin with Profilin and Accoa-NAA80, PDB code: 6nas was solved by G.Rebowski, M.Boczkowska, R.Dominguez, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 28.72 / 2.90
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 103.830, 114.890, 132.271, 90.00, 90.00, 90.00
R / Rfree (%) 18.4 / 23.9

Calcium Binding Sites:

The binding sites of Calcium atom in the Ternary Complex of Ac-Alpha-Actin with Profilin and Accoa-NAA80 (pdb code 6nas). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Ternary Complex of Ac-Alpha-Actin with Profilin and Accoa-NAA80, PDB code: 6nas:

Calcium binding site 1 out of 1 in 6nas

Go back to Calcium Binding Sites List in 6nas
Calcium binding site 1 out of 1 in the Ternary Complex of Ac-Alpha-Actin with Profilin and Accoa-NAA80


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Ternary Complex of Ac-Alpha-Actin with Profilin and Accoa-NAA80 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca400

b:34.4
occ:1.00
O3G A:ATP401 2.2 36.8 1.0
O1B A:ATP401 2.5 26.9 1.0
PG A:ATP401 3.5 28.2 1.0
HA2 A:GLY13 3.6 35.7 1.0
OE1 A:GLN137 3.7 32.5 1.0
CD A:GLN137 3.8 25.4 1.0
PB A:ATP401 3.9 20.5 1.0
HG2 A:GLN137 3.9 33.8 1.0
HZ2 A:LYS18 4.0 28.4 1.0
HA3 A:GLY13 4.0 35.7 1.0
O2G A:ATP401 4.1 23.9 1.0
HG21 A:VAL339 4.1 34.8 1.0
O3B A:ATP401 4.1 25.9 1.0
NE2 A:GLN137 4.2 29.8 1.0
HB3 A:GLN137 4.2 35.5 1.0
OD1 A:ASP11 4.2 31.2 1.0
CA A:GLY13 4.3 29.7 1.0
CG A:GLN137 4.3 28.2 1.0
HE22 A:GLN137 4.3 35.8 1.0
HG11 A:VAL339 4.5 31.8 1.0
OD2 A:ASP11 4.5 33.9 1.0
OD2 A:ASP154 4.6 32.8 1.0
OD1 A:ASP154 4.6 33.5 1.0
HE21 A:GLN137 4.6 35.8 1.0
HZ3 A:LYS18 4.6 28.4 1.0
NZ A:LYS18 4.7 23.7 1.0
CB A:GLN137 4.7 29.6 1.0
O1G A:ATP401 4.7 23.5 1.0
O3A A:ATP401 4.7 22.2 1.0
HB2 A:GLN137 4.8 35.5 1.0
H A:SER14 4.8 30.4 1.0
O1A A:ATP401 4.8 24.1 1.0
O A:ASN12 4.8 32.8 1.0
CG A:ASP11 4.8 32.9 1.0
HA3 A:GLY156 4.8 26.7 1.0
CG A:ASP154 5.0 37.8 1.0
HZ1 A:LYS18 5.0 28.4 1.0
O2B A:ATP401 5.0 23.2 1.0

Reference:

G.Rebowski, M.Boczkowska, R.Dominguez. Ternary Complex of Ac-Alpha-Actin with Profilin and Accoa-NAA80 To Be Published.
Page generated: Wed Jul 9 16:19:13 2025

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