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Calcium in PDB 6nbw: Ternary Complex of Beta/Gamma-Actin with Profilin and Ancoa-NAA80

Protein crystallography data

The structure of Ternary Complex of Beta/Gamma-Actin with Profilin and Ancoa-NAA80, PDB code: 6nbw was solved by G.Rebowski, M.Boczkowska, R.Dominguez, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 26.10 / 2.50
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 104.406, 115.594, 132.195, 90.00, 90.00, 90.00
R / Rfree (%) 17.8 / 20.9

Calcium Binding Sites:

The binding sites of Calcium atom in the Ternary Complex of Beta/Gamma-Actin with Profilin and Ancoa-NAA80 (pdb code 6nbw). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Ternary Complex of Beta/Gamma-Actin with Profilin and Ancoa-NAA80, PDB code: 6nbw:

Calcium binding site 1 out of 1 in 6nbw

Go back to Calcium Binding Sites List in 6nbw
Calcium binding site 1 out of 1 in the Ternary Complex of Beta/Gamma-Actin with Profilin and Ancoa-NAA80


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Ternary Complex of Beta/Gamma-Actin with Profilin and Ancoa-NAA80 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca401

b:26.1
occ:1.00
O1B A:ATP402 2.2 28.2 1.0
O3G A:ATP402 2.2 27.0 1.0
O A:HOH519 2.4 24.1 1.0
O A:HOH511 2.5 28.2 1.0
O A:HOH518 2.6 27.2 1.0
O A:HOH522 2.6 29.0 1.0
O A:HOH533 2.7 26.7 1.0
PG A:ATP402 3.5 24.6 1.0
PB A:ATP402 3.5 24.6 1.0
HA2 A:GLY13 3.7 35.6 1.0
HZ3 A:LYS18 3.8 36.1 1.0
HA3 A:GLY13 3.8 35.6 1.0
O3B A:ATP402 3.9 26.6 1.0
OE1 A:GLN137 4.0 27.1 1.0
HG21 A:VAL339 4.0 36.0 1.0
O2G A:ATP402 4.0 25.8 1.0
O A:HOH549 4.1 27.6 1.0
O3A A:ATP402 4.2 25.6 1.0
CA A:GLY13 4.2 29.7 1.0
CD A:GLN137 4.2 27.0 1.0
O1A A:ATP402 4.3 27.8 1.0
HZ1 A:LYS18 4.4 36.1 1.0
HG2 A:GLN137 4.4 32.7 1.0
NZ A:LYS18 4.4 30.1 1.0
O A:HOH524 4.5 28.6 1.0
HA3 A:GLY156 4.5 32.8 1.0
HZ2 A:LYS18 4.5 36.1 1.0
OD1 A:ASP11 4.5 28.8 1.0
HB3 A:GLN137 4.6 33.2 1.0
OD2 A:ASP154 4.6 29.4 1.0
NE2 A:GLN137 4.7 25.6 1.0
OD1 A:ASP154 4.7 29.3 1.0
OD2 A:ASP11 4.7 29.8 1.0
H A:SER14 4.7 34.4 1.0
HE22 A:GLN137 4.7 30.7 1.0
O1G A:ATP402 4.7 28.8 1.0
PA A:ATP402 4.7 25.2 1.0
O2B A:ATP402 4.7 29.0 1.0
O A:HOH538 4.8 27.9 1.0
HG11 A:VAL339 4.8 35.0 1.0
CG A:GLN137 4.8 27.2 1.0
O A:ASN12 5.0 28.5 1.0
CG2 A:VAL339 5.0 30.0 1.0

Reference:

G.Rebowski, M.Boczkowska, R.Dominguez. Ternary Complex of Beta/Gamma-Actin with Profilin and Ancoa-NAA80 To Be Published.
Page generated: Wed Jul 9 16:19:43 2025

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