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Calcium in PDB 6oy3: NHTMEM16 L302A +CA2+ in Nanodiscs

Calcium Binding Sites:

The binding sites of Calcium atom in the NHTMEM16 L302A +CA2+ in Nanodiscs (pdb code 6oy3). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 4 binding sites of Calcium where determined in the NHTMEM16 L302A +CA2+ in Nanodiscs, PDB code: 6oy3:
Jump to Calcium binding site number: 1; 2; 3; 4;

Calcium binding site 1 out of 4 in 6oy3

Go back to Calcium Binding Sites List in 6oy3
Calcium binding site 1 out of 4 in the NHTMEM16 L302A +CA2+ in Nanodiscs


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of NHTMEM16 L302A +CA2+ in Nanodiscs within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Ca801

b:42.5
occ:1.00
OE1 B:GLU535 2.5 28.3 1.0
OD1 B:ASN448 2.5 24.9 1.0
OE2 B:GLU535 3.0 28.3 1.0
CD B:GLU535 3.0 28.3 1.0
OE2 B:GLU506 3.1 23.2 1.0
CA B:CA802 3.2 52.5 1.0
CG B:ASN448 3.6 24.9 1.0
OE1 B:GLU452 3.7 28.2 1.0
CD B:GLU506 3.8 23.2 1.0
CG B:GLU535 4.4 28.3 1.0
OE1 B:GLU506 4.4 23.2 1.0
CG B:GLU506 4.4 23.2 1.0
CB B:ASN448 4.5 24.9 1.0
ND2 B:ASN531 4.5 26.8 1.0
ND2 B:ASN448 4.6 24.9 1.0
CD B:GLU452 4.8 28.2 1.0

Calcium binding site 2 out of 4 in 6oy3

Go back to Calcium Binding Sites List in 6oy3
Calcium binding site 2 out of 4 in the NHTMEM16 L302A +CA2+ in Nanodiscs


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of NHTMEM16 L302A +CA2+ in Nanodiscs within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Ca802

b:52.5
occ:1.00
OE2 B:GLU452 2.5 28.2 1.0
OE2 B:GLU535 2.5 28.3 1.0
OE1 B:GLU452 2.6 28.2 1.0
CD B:GLU452 2.8 28.2 1.0
CA B:CA801 3.2 42.5 1.0
OD1 B:ASP503 3.3 24.5 1.0
CD B:GLU535 3.6 28.3 1.0
OD1 B:ASN448 3.9 24.9 1.0
CG B:GLU506 4.0 23.2 1.0
CD B:GLU506 4.1 23.2 1.0
CG B:GLU452 4.2 28.2 1.0
OE1 B:GLU535 4.2 28.3 1.0
CB B:GLU506 4.2 23.2 1.0
OE2 B:GLU506 4.4 23.2 1.0
CG B:ASP503 4.5 24.5 1.0
OE1 B:GLU506 4.5 23.2 1.0
CG B:GLU535 4.7 28.3 1.0
OD1 B:ASP539 4.7 27.8 1.0
CG B:ASN448 4.9 24.9 1.0
CB B:GLU452 5.0 28.2 1.0

Calcium binding site 3 out of 4 in 6oy3

Go back to Calcium Binding Sites List in 6oy3
Calcium binding site 3 out of 4 in the NHTMEM16 L302A +CA2+ in Nanodiscs


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 3 of NHTMEM16 L302A +CA2+ in Nanodiscs within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca801

b:42.5
occ:1.00
OE1 A:GLU535 2.5 28.3 1.0
OD1 A:ASN448 2.5 24.9 1.0
OE2 A:GLU535 3.0 28.3 1.0
CD A:GLU535 3.0 28.3 1.0
OE2 A:GLU506 3.1 23.2 1.0
CA A:CA802 3.2 52.5 1.0
CG A:ASN448 3.6 24.9 1.0
OE1 A:GLU452 3.7 28.2 1.0
CD A:GLU506 3.8 23.2 1.0
CG A:GLU535 4.4 28.3 1.0
OE1 A:GLU506 4.4 23.2 1.0
CG A:GLU506 4.4 23.2 1.0
CB A:ASN448 4.5 24.9 1.0
ND2 A:ASN531 4.5 26.8 1.0
ND2 A:ASN448 4.6 24.9 1.0
CD A:GLU452 4.8 28.2 1.0

Calcium binding site 4 out of 4 in 6oy3

Go back to Calcium Binding Sites List in 6oy3
Calcium binding site 4 out of 4 in the NHTMEM16 L302A +CA2+ in Nanodiscs


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 4 of NHTMEM16 L302A +CA2+ in Nanodiscs within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca802

b:52.5
occ:1.00
OE2 A:GLU452 2.5 28.2 1.0
OE2 A:GLU535 2.5 28.3 1.0
OE1 A:GLU452 2.6 28.2 1.0
CD A:GLU452 2.8 28.2 1.0
CA A:CA801 3.2 42.5 1.0
OD1 A:ASP503 3.3 24.5 1.0
CD A:GLU535 3.6 28.3 1.0
OD1 A:ASN448 3.9 24.9 1.0
CG A:GLU506 4.0 23.2 1.0
CD A:GLU506 4.1 23.2 1.0
CG A:GLU452 4.2 28.2 1.0
OE1 A:GLU535 4.2 28.3 1.0
CB A:GLU506 4.2 23.2 1.0
OE2 A:GLU506 4.4 23.2 1.0
CG A:ASP503 4.5 24.5 1.0
OE1 A:GLU506 4.5 23.2 1.0
CG A:GLU535 4.7 28.3 1.0
OD1 A:ASP539 4.7 27.8 1.0
CG A:ASN448 4.9 24.9 1.0
CB A:GLU452 5.0 28.2 1.0

Reference:

M.Falzone, B.Lee, A.Accardi. NHTMEM16 L302A +CA2+ in Nanodiscs To Be Published.
Page generated: Tue Jul 16 12:38:54 2024

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