Calcium in PDB 6psd: Complex of CRACR2A with A Dynein Light Intermediate Chain Peptide
Protein crystallography data
The structure of Complex of CRACR2A with A Dynein Light Intermediate Chain Peptide, PDB code: 6psd
was solved by
R.Dominguez,
I.G.Lee,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
|
Resolution Low / High (Å)
|
43.35 /
2.66
|
|
Space group
|
P 1 21 1
|
|
Cell size a, b, c (Å), α, β, γ (°)
|
57.290,
161.990,
56.900,
90.00,
104.01,
90.00
|
|
R / Rfree (%)
|
19.7 /
23.2
|
Calcium Binding Sites:
The binding sites of Calcium atom in the Complex of CRACR2A with A Dynein Light Intermediate Chain Peptide
(pdb code 6psd). This binding sites where shown within
5.0 Angstroms radius around Calcium atom.
In total 8 binding sites of Calcium where determined in the
Complex of CRACR2A with A Dynein Light Intermediate Chain Peptide, PDB code: 6psd:
Jump to Calcium binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
Calcium binding site 1 out
of 8 in 6psd
Go back to
Calcium Binding Sites List in 6psd
Calcium binding site 1 out
of 8 in the Complex of CRACR2A with A Dynein Light Intermediate Chain Peptide
 Mono view
 Stereo pair view
|
|
A full contact list of Calcium with other atoms in the Ca binding
site number 1 of Complex of CRACR2A with A Dynein Light Intermediate Chain Peptide within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
E:Ca201
b:36.8
occ:1.00
|
OD1
|
E:ASP97
|
2.2
|
50.5
|
1.0
|
|
O
|
E:TYR103
|
2.3
|
43.6
|
1.0
|
|
OD1
|
E:ASP99
|
2.4
|
68.8
|
1.0
|
|
OE2
|
E:GLU108
|
2.4
|
32.6
|
1.0
|
|
OE1
|
E:GLU108
|
2.5
|
36.7
|
1.0
|
|
CD
|
E:GLU108
|
2.8
|
36.7
|
1.0
|
|
OD1
|
E:ASN101
|
3.0
|
82.1
|
1.0
|
|
CG
|
E:ASP97
|
3.1
|
54.6
|
1.0
|
|
CG
|
E:ASP99
|
3.2
|
67.3
|
1.0
|
|
OD2
|
E:ASP99
|
3.3
|
67.8
|
1.0
|
|
OD2
|
E:ASP97
|
3.4
|
55.2
|
1.0
|
|
CB
|
E:ASN101
|
3.5
|
68.2
|
1.0
|
|
CG
|
E:ASN101
|
3.5
|
76.3
|
1.0
|
|
C
|
E:TYR103
|
3.5
|
46.0
|
1.0
|
|
N
|
E:ASN101
|
4.0
|
70.4
|
1.0
|
|
CG
|
E:GLU108
|
4.3
|
36.1
|
1.0
|
|
N
|
E:TYR103
|
4.4
|
49.1
|
1.0
|
|
CA
|
E:ASN101
|
4.4
|
65.1
|
1.0
|
|
CA
|
E:TYR103
|
4.4
|
48.7
|
1.0
|
|
CB
|
E:ASP97
|
4.4
|
52.4
|
1.0
|
|
N
|
E:LEU104
|
4.5
|
47.4
|
1.0
|
|
CB
|
E:TYR103
|
4.5
|
46.8
|
1.0
|
|
CB
|
E:ASP99
|
4.6
|
65.7
|
1.0
|
|
ND2
|
E:ASN101
|
4.6
|
82.5
|
1.0
|
|
CA
|
E:LEU104
|
4.6
|
47.6
|
1.0
|
|
OG1
|
E:THR105
|
4.7
|
32.7
|
1.0
|
|
N
|
E:THR105
|
4.7
|
43.3
|
1.0
|
|
CA
|
E:ASP97
|
4.7
|
51.5
|
1.0
|
|
CG2
|
E:THR105
|
4.7
|
36.7
|
1.0
|
|
N
|
E:ASP99
|
4.8
|
61.6
|
1.0
|
|
N
|
E:GLY100
|
4.8
|
68.7
|
1.0
|
|
C
|
E:ASP97
|
5.0
|
49.1
|
1.0
|
|
Calcium binding site 2 out
of 8 in 6psd
Go back to
Calcium Binding Sites List in 6psd
Calcium binding site 2 out
of 8 in the Complex of CRACR2A with A Dynein Light Intermediate Chain Peptide
 Mono view
 Stereo pair view
|
|
A full contact list of Calcium with other atoms in the Ca binding
site number 2 of Complex of CRACR2A with A Dynein Light Intermediate Chain Peptide within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Ca201
b:64.8
occ:1.00
|
OD1
|
C:ASP97
|
2.3
|
86.4
|
1.0
|
|
OD1
|
C:ASP99
|
2.3
|
0.4
|
1.0
|
|
O
|
C:TYR103
|
2.4
|
69.0
|
1.0
|
|
CB
|
C:ASN101
|
2.7
|
0.6
|
1.0
|
|
OE2
|
C:GLU108
|
2.9
|
91.0
|
1.0
|
|
CG
|
C:ASP99
|
3.3
|
0.6
|
1.0
|
|
N
|
C:ASN101
|
3.3
|
0.2
|
1.0
|
|
CG
|
C:ASP97
|
3.4
|
91.3
|
1.0
|
|
CA
|
C:ASN101
|
3.4
|
0.4
|
1.0
|
|
OD2
|
C:ASP99
|
3.5
|
0.8
|
1.0
|
|
C
|
C:TYR103
|
3.6
|
69.9
|
1.0
|
|
CG
|
C:ASN101
|
3.7
|
1.0
|
1.0
|
|
CD
|
C:GLU108
|
3.8
|
97.5
|
1.0
|
|
OD1
|
C:ASN101
|
3.8
|
0.2
|
1.0
|
|
C
|
C:ASN101
|
3.8
|
0.7
|
1.0
|
|
OD2
|
C:ASP97
|
3.8
|
97.7
|
1.0
|
|
OE1
|
C:GLU108
|
3.9
|
0.8
|
1.0
|
|
N
|
C:TYR103
|
4.0
|
77.9
|
1.0
|
|
O
|
C:ASN101
|
4.2
|
0.1
|
1.0
|
|
N
|
C:GLY102
|
4.3
|
97.3
|
1.0
|
|
CA
|
C:TYR103
|
4.4
|
75.6
|
1.0
|
|
N
|
C:GLY100
|
4.4
|
0.4
|
1.0
|
|
C
|
C:GLY100
|
4.5
|
0.6
|
1.0
|
|
CB
|
C:ASP97
|
4.6
|
94.1
|
1.0
|
|
CB
|
C:ASP99
|
4.6
|
0.7
|
1.0
|
|
N
|
C:LEU104
|
4.6
|
73.1
|
1.0
|
|
N
|
C:ASP99
|
4.6
|
0.7
|
1.0
|
|
CA
|
C:ASP97
|
4.7
|
92.0
|
1.0
|
|
CA
|
C:LEU104
|
4.8
|
73.5
|
1.0
|
|
C
|
C:ASP99
|
4.8
|
0.7
|
1.0
|
|
CB
|
C:TYR103
|
4.8
|
77.4
|
1.0
|
|
CA
|
C:ASP99
|
4.9
|
0.1
|
1.0
|
|
ND2
|
C:ASN101
|
4.9
|
0.9
|
1.0
|
|
C
|
C:ASP97
|
4.9
|
98.5
|
1.0
|
|
CA
|
C:GLY100
|
5.0
|
0.3
|
1.0
|
|
CG2
|
C:THR105
|
5.0
|
74.5
|
1.0
|
|
Calcium binding site 3 out
of 8 in 6psd
Go back to
Calcium Binding Sites List in 6psd
Calcium binding site 3 out
of 8 in the Complex of CRACR2A with A Dynein Light Intermediate Chain Peptide
 Mono view
 Stereo pair view
|
|
A full contact list of Calcium with other atoms in the Ca binding
site number 3 of Complex of CRACR2A with A Dynein Light Intermediate Chain Peptide within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Ca201
b:41.4
occ:1.00
|
O
|
A:TYR103
|
2.2
|
56.5
|
1.0
|
|
OE2
|
A:GLU108
|
2.3
|
50.5
|
1.0
|
|
OD1
|
A:ASP99
|
2.4
|
60.2
|
1.0
|
|
OE1
|
A:GLU108
|
2.4
|
52.2
|
1.0
|
|
OD1
|
A:ASP97
|
2.6
|
70.2
|
1.0
|
|
CD
|
A:GLU108
|
2.7
|
50.0
|
1.0
|
|
OD1
|
A:ASN101
|
2.7
|
83.7
|
1.0
|
|
O
|
A:HOH302
|
3.1
|
37.4
|
1.0
|
|
CG
|
A:ASP99
|
3.1
|
58.7
|
1.0
|
|
OD2
|
A:ASP99
|
3.1
|
56.5
|
1.0
|
|
CG
|
A:ASN101
|
3.3
|
86.3
|
1.0
|
|
C
|
A:TYR103
|
3.5
|
57.0
|
1.0
|
|
CG
|
A:ASP97
|
3.6
|
64.3
|
1.0
|
|
CB
|
A:ASN101
|
3.7
|
74.2
|
1.0
|
|
CG
|
A:GLU108
|
4.2
|
46.9
|
1.0
|
|
OD2
|
A:ASP97
|
4.2
|
67.2
|
1.0
|
|
N
|
A:ASN101
|
4.2
|
67.2
|
1.0
|
|
N
|
A:LEU104
|
4.3
|
57.3
|
1.0
|
|
ND2
|
A:ASN101
|
4.4
|
92.4
|
1.0
|
|
CA
|
A:LEU104
|
4.4
|
58.0
|
1.0
|
|
N
|
A:THR105
|
4.4
|
57.4
|
1.0
|
|
CA
|
A:TYR103
|
4.4
|
56.5
|
1.0
|
|
N
|
A:TYR103
|
4.5
|
57.0
|
1.0
|
|
CB
|
A:ASP99
|
4.5
|
59.9
|
1.0
|
|
CA
|
A:ASP97
|
4.5
|
52.9
|
1.0
|
|
N
|
A:ASP99
|
4.5
|
60.0
|
1.0
|
|
OG1
|
A:THR105
|
4.5
|
51.5
|
1.0
|
|
CA
|
A:ASN101
|
4.5
|
66.0
|
1.0
|
|
CB
|
A:ASP97
|
4.6
|
55.6
|
1.0
|
|
CG2
|
A:THR105
|
4.6
|
58.6
|
1.0
|
|
CB
|
A:TYR103
|
4.7
|
54.2
|
1.0
|
|
C
|
A:ASP97
|
4.7
|
53.5
|
1.0
|
|
N
|
A:ALA98
|
4.8
|
50.3
|
1.0
|
|
N
|
A:GLY100
|
4.8
|
56.1
|
1.0
|
|
C
|
A:LEU104
|
4.9
|
56.8
|
1.0
|
|
CA
|
A:ASP99
|
4.9
|
60.0
|
1.0
|
|
CB
|
A:GLU108
|
5.0
|
46.4
|
1.0
|
|
Calcium binding site 4 out
of 8 in 6psd
Go back to
Calcium Binding Sites List in 6psd
Calcium binding site 4 out
of 8 in the Complex of CRACR2A with A Dynein Light Intermediate Chain Peptide
 Mono view
 Stereo pair view
|
|
A full contact list of Calcium with other atoms in the Ca binding
site number 4 of Complex of CRACR2A with A Dynein Light Intermediate Chain Peptide within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
G:Ca201
b:54.5
occ:1.00
|
O
|
G:TYR103
|
2.2
|
61.9
|
1.0
|
|
OD1
|
G:ASP97
|
2.4
|
79.7
|
1.0
|
|
OE2
|
G:GLU108
|
2.4
|
59.7
|
1.0
|
|
OD1
|
G:ASP99
|
2.4
|
64.9
|
1.0
|
|
OE1
|
G:GLU108
|
2.5
|
65.8
|
1.0
|
|
CD
|
G:GLU108
|
2.7
|
67.3
|
1.0
|
|
OD1
|
G:ASN101
|
2.8
|
97.6
|
1.0
|
|
C
|
G:TYR103
|
3.3
|
68.3
|
1.0
|
|
CG
|
G:ASP99
|
3.4
|
78.5
|
1.0
|
|
CB
|
G:ASN101
|
3.6
|
92.0
|
1.0
|
|
CG
|
G:ASN101
|
3.6
|
92.8
|
1.0
|
|
CG
|
G:ASP97
|
3.6
|
81.4
|
1.0
|
|
OD2
|
G:ASP99
|
3.6
|
72.4
|
1.0
|
|
N
|
G:ASN101
|
4.0
|
81.2
|
1.0
|
|
N
|
G:TYR103
|
4.1
|
72.3
|
1.0
|
|
CA
|
G:TYR103
|
4.2
|
70.1
|
1.0
|
|
CG
|
G:GLU108
|
4.2
|
66.9
|
1.0
|
|
N
|
G:LEU104
|
4.3
|
64.4
|
1.0
|
|
OD2
|
G:ASP97
|
4.3
|
80.2
|
1.0
|
|
CA
|
G:ASP97
|
4.3
|
81.0
|
1.0
|
|
CA
|
G:ASN101
|
4.4
|
88.4
|
1.0
|
|
CB
|
G:TYR103
|
4.4
|
65.6
|
1.0
|
|
CA
|
G:LEU104
|
4.4
|
66.4
|
1.0
|
|
CB
|
G:ASP97
|
4.6
|
82.1
|
1.0
|
|
N
|
G:THR105
|
4.6
|
67.5
|
1.0
|
|
N
|
G:ASP99
|
4.6
|
91.2
|
1.0
|
|
C
|
G:ASP97
|
4.7
|
85.3
|
1.0
|
|
N
|
G:GLY100
|
4.7
|
90.5
|
1.0
|
|
CB
|
G:ASP99
|
4.8
|
81.4
|
1.0
|
|
N
|
G:ALA98
|
4.8
|
93.2
|
1.0
|
|
CG2
|
G:THR105
|
4.8
|
71.4
|
1.0
|
|
ND2
|
G:ASN101
|
4.9
|
93.6
|
1.0
|
|
OG1
|
G:THR105
|
4.9
|
65.4
|
1.0
|
|
C
|
G:LEU104
|
5.0
|
62.7
|
1.0
|
|
N
|
G:GLY102
|
5.0
|
90.7
|
1.0
|
|
Calcium binding site 5 out
of 8 in 6psd
Go back to
Calcium Binding Sites List in 6psd
Calcium binding site 5 out
of 8 in the Complex of CRACR2A with A Dynein Light Intermediate Chain Peptide
 Mono view
 Stereo pair view
|
|
A full contact list of Calcium with other atoms in the Ca binding
site number 5 of Complex of CRACR2A with A Dynein Light Intermediate Chain Peptide within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
I:Ca201
b:51.4
occ:1.00
|
OD1
|
I:ASP97
|
2.1
|
52.5
|
1.0
|
|
OE2
|
I:GLU108
|
2.3
|
64.0
|
1.0
|
|
OD1
|
I:ASP99
|
2.4
|
45.1
|
1.0
|
|
O
|
I:TYR103
|
2.4
|
38.4
|
1.0
|
|
OE1
|
I:GLU108
|
2.5
|
66.7
|
1.0
|
|
OD1
|
I:ASN101
|
2.5
|
88.8
|
1.0
|
|
CD
|
I:GLU108
|
2.6
|
60.6
|
1.0
|
|
CG
|
I:ASN101
|
3.3
|
73.3
|
1.0
|
|
CG
|
I:ASP99
|
3.3
|
52.0
|
1.0
|
|
CG
|
I:ASP97
|
3.4
|
49.5
|
1.0
|
|
CB
|
I:ASN101
|
3.4
|
69.2
|
1.0
|
|
C
|
I:TYR103
|
3.6
|
42.6
|
1.0
|
|
OD2
|
I:ASP99
|
3.6
|
53.2
|
1.0
|
|
N
|
I:ASN101
|
4.0
|
53.7
|
1.0
|
|
CG
|
I:GLU108
|
4.1
|
57.8
|
1.0
|
|
CA
|
I:ASP97
|
4.2
|
45.7
|
1.0
|
|
OD2
|
I:ASP97
|
4.2
|
48.3
|
1.0
|
|
CB
|
I:ASP97
|
4.2
|
46.0
|
1.0
|
|
CA
|
I:LEU104
|
4.3
|
50.1
|
1.0
|
|
CA
|
I:ASN101
|
4.3
|
59.9
|
1.0
|
|
N
|
I:LEU104
|
4.4
|
45.4
|
1.0
|
|
N
|
I:THR105
|
4.4
|
52.9
|
1.0
|
|
C
|
I:ASP97
|
4.4
|
43.0
|
1.0
|
|
N
|
I:ASP99
|
4.5
|
52.5
|
1.0
|
|
N
|
I:ALA98
|
4.6
|
42.5
|
1.0
|
|
N
|
I:TYR103
|
4.6
|
40.8
|
1.0
|
|
ND2
|
I:ASN101
|
4.6
|
77.2
|
1.0
|
|
CA
|
I:TYR103
|
4.6
|
44.5
|
1.0
|
|
CB
|
I:ASP99
|
4.7
|
55.1
|
1.0
|
|
N
|
I:GLY100
|
4.7
|
50.1
|
1.0
|
|
CG2
|
I:THR105
|
4.7
|
53.5
|
1.0
|
|
C
|
I:LEU104
|
4.7
|
52.6
|
1.0
|
|
OG1
|
I:THR105
|
4.8
|
47.8
|
1.0
|
|
CB
|
I:GLU108
|
4.9
|
52.9
|
1.0
|
|
CA
|
I:ASP99
|
5.0
|
54.0
|
1.0
|
|
O
|
I:ASP97
|
5.0
|
36.8
|
1.0
|
|
Calcium binding site 6 out
of 8 in 6psd
Go back to
Calcium Binding Sites List in 6psd
Calcium binding site 6 out
of 8 in the Complex of CRACR2A with A Dynein Light Intermediate Chain Peptide
 Mono view
 Stereo pair view
|
|
A full contact list of Calcium with other atoms in the Ca binding
site number 6 of Complex of CRACR2A with A Dynein Light Intermediate Chain Peptide within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
K:Ca201
b:30.7
occ:1.00
|
OD1
|
K:ASP97
|
2.0
|
42.8
|
1.0
|
|
O
|
K:TYR103
|
2.2
|
34.3
|
1.0
|
|
OD1
|
K:ASP99
|
2.2
|
41.8
|
1.0
|
|
OE2
|
K:GLU108
|
2.5
|
29.3
|
1.0
|
|
OE1
|
K:GLU108
|
2.6
|
33.4
|
1.0
|
|
CD
|
K:GLU108
|
2.8
|
31.8
|
1.0
|
|
CG
|
K:ASP99
|
2.9
|
40.2
|
1.0
|
|
OD2
|
K:ASP99
|
3.0
|
40.9
|
1.0
|
|
OD1
|
K:ASN101
|
3.1
|
59.7
|
1.0
|
|
CG
|
K:ASP97
|
3.1
|
44.0
|
1.0
|
|
C
|
K:TYR103
|
3.3
|
33.9
|
1.0
|
|
OD2
|
K:ASP97
|
3.5
|
48.5
|
1.0
|
|
CG
|
K:ASN101
|
3.6
|
47.9
|
1.0
|
|
CB
|
K:ASN101
|
3.6
|
43.3
|
1.0
|
|
N
|
K:ASN101
|
4.2
|
44.6
|
1.0
|
|
CG
|
K:GLU108
|
4.3
|
34.8
|
1.0
|
|
CA
|
K:TYR103
|
4.3
|
34.3
|
1.0
|
|
N
|
K:LEU104
|
4.3
|
37.7
|
1.0
|
|
N
|
K:TYR103
|
4.3
|
33.8
|
1.0
|
|
CB
|
K:ASP97
|
4.3
|
42.0
|
1.0
|
|
CB
|
K:ASP99
|
4.4
|
42.8
|
1.0
|
|
CB
|
K:TYR103
|
4.5
|
39.0
|
1.0
|
|
CA
|
K:LEU104
|
4.5
|
39.5
|
1.0
|
|
CA
|
K:ASN101
|
4.5
|
42.3
|
1.0
|
|
CA
|
K:ASP97
|
4.6
|
39.4
|
1.0
|
|
N
|
K:THR105
|
4.6
|
38.5
|
1.0
|
|
CG2
|
K:THR105
|
4.6
|
45.0
|
1.0
|
|
N
|
K:ASP99
|
4.6
|
46.1
|
1.0
|
|
ND2
|
K:ASN101
|
4.6
|
51.8
|
1.0
|
|
OG1
|
K:THR105
|
4.7
|
52.9
|
1.0
|
|
N
|
K:GLY100
|
4.8
|
40.2
|
1.0
|
|
CA
|
K:ASP99
|
4.9
|
43.6
|
1.0
|
|
C
|
K:ASP97
|
4.9
|
40.9
|
1.0
|
|
C
|
K:ASP99
|
4.9
|
43.9
|
1.0
|
|
Calcium binding site 7 out
of 8 in 6psd
Go back to
Calcium Binding Sites List in 6psd
Calcium binding site 7 out
of 8 in the Complex of CRACR2A with A Dynein Light Intermediate Chain Peptide
 Mono view
 Stereo pair view
|
|
A full contact list of Calcium with other atoms in the Ca binding
site number 7 of Complex of CRACR2A with A Dynein Light Intermediate Chain Peptide within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
M:Ca201
b:47.2
occ:1.00
|
O
|
M:TYR103
|
2.0
|
59.3
|
1.0
|
|
OD1
|
M:ASP99
|
2.1
|
71.7
|
1.0
|
|
OD1
|
M:ASN101
|
2.2
|
98.0
|
1.0
|
|
OD1
|
M:ASP97
|
2.3
|
67.5
|
1.0
|
|
OE1
|
M:GLU108
|
2.5
|
63.0
|
1.0
|
|
OE2
|
M:GLU108
|
2.7
|
56.5
|
1.0
|
|
CG
|
M:ASN101
|
2.8
|
86.9
|
1.0
|
|
CD
|
M:GLU108
|
2.9
|
61.8
|
1.0
|
|
CG
|
M:ASP99
|
3.0
|
79.7
|
1.0
|
|
CB
|
M:ASN101
|
3.0
|
78.9
|
1.0
|
|
OD2
|
M:ASP99
|
3.2
|
77.9
|
1.0
|
|
C
|
M:TYR103
|
3.2
|
60.8
|
1.0
|
|
CG
|
M:ASP97
|
3.5
|
65.9
|
1.0
|
|
N
|
M:ASN101
|
3.5
|
80.0
|
1.0
|
|
ND2
|
M:ASN101
|
3.8
|
94.8
|
1.0
|
|
CA
|
M:ASN101
|
3.9
|
78.0
|
1.0
|
|
N
|
M:TYR103
|
4.0
|
65.4
|
1.0
|
|
CA
|
M:TYR103
|
4.1
|
63.6
|
1.0
|
|
OD2
|
M:ASP97
|
4.1
|
65.5
|
1.0
|
|
N
|
M:LEU104
|
4.3
|
64.7
|
1.0
|
|
CB
|
M:ASP99
|
4.3
|
85.1
|
1.0
|
|
N
|
M:ASP99
|
4.4
|
89.4
|
1.0
|
|
CG
|
M:GLU108
|
4.4
|
58.9
|
1.0
|
|
N
|
M:GLY100
|
4.5
|
89.3
|
1.0
|
|
CA
|
M:LEU104
|
4.5
|
62.2
|
1.0
|
|
CA
|
M:ASP97
|
4.5
|
66.8
|
1.0
|
|
CB
|
M:TYR103
|
4.5
|
64.7
|
1.0
|
|
CB
|
M:ASP97
|
4.6
|
64.9
|
1.0
|
|
CG2
|
M:THR105
|
4.7
|
60.8
|
1.0
|
|
CA
|
M:ASP99
|
4.7
|
88.6
|
1.0
|
|
C
|
M:GLY100
|
4.7
|
81.2
|
1.0
|
|
C
|
M:ASN101
|
4.7
|
73.2
|
1.0
|
|
N
|
M:THR105
|
4.7
|
61.3
|
1.0
|
|
C
|
M:ASP99
|
4.7
|
91.5
|
1.0
|
|
C
|
M:ASP97
|
4.8
|
67.4
|
1.0
|
|
N
|
M:GLY102
|
4.8
|
64.0
|
1.0
|
|
N
|
M:ALA98
|
4.9
|
72.8
|
1.0
|
|
Calcium binding site 8 out
of 8 in 6psd
Go back to
Calcium Binding Sites List in 6psd
Calcium binding site 8 out
of 8 in the Complex of CRACR2A with A Dynein Light Intermediate Chain Peptide
 Mono view
 Stereo pair view
|
|
A full contact list of Calcium with other atoms in the Ca binding
site number 8 of Complex of CRACR2A with A Dynein Light Intermediate Chain Peptide within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
O:Ca201
b:69.2
occ:1.00
|
OE2
|
O:GLU108
|
2.0
|
67.6
|
1.0
|
|
O
|
O:TYR103
|
2.2
|
78.9
|
1.0
|
|
OD1
|
O:ASP99
|
2.2
|
88.4
|
1.0
|
|
OD1
|
O:ASP97
|
2.4
|
76.2
|
1.0
|
|
OD2
|
O:ASP99
|
2.6
|
0.2
|
1.0
|
|
OE1
|
O:GLU108
|
2.6
|
68.5
|
1.0
|
|
CD
|
O:GLU108
|
2.6
|
64.0
|
1.0
|
|
CG
|
O:ASP99
|
2.7
|
96.7
|
1.0
|
|
CB
|
O:ASN101
|
3.1
|
85.1
|
1.0
|
|
C
|
O:TYR103
|
3.4
|
72.4
|
1.0
|
|
CG
|
O:ASP97
|
3.6
|
74.6
|
1.0
|
|
CG
|
O:ASN101
|
4.0
|
83.2
|
1.0
|
|
OD1
|
O:ASN101
|
4.1
|
83.3
|
1.0
|
|
CG
|
O:GLU108
|
4.1
|
63.7
|
1.0
|
|
N
|
O:ASN101
|
4.1
|
81.7
|
1.0
|
|
CB
|
O:ASP99
|
4.2
|
94.0
|
1.0
|
|
CA
|
O:ASN101
|
4.2
|
84.4
|
1.0
|
|
N
|
O:TYR103
|
4.2
|
84.7
|
1.0
|
|
CA
|
O:ASP97
|
4.3
|
74.7
|
1.0
|
|
N
|
O:LEU104
|
4.3
|
65.2
|
1.0
|
|
CA
|
O:TYR103
|
4.3
|
79.9
|
1.0
|
|
CA
|
O:LEU104
|
4.4
|
59.3
|
1.0
|
|
OD2
|
O:ASP97
|
4.4
|
76.8
|
1.0
|
|
N
|
O:THR105
|
4.4
|
56.5
|
1.0
|
|
N
|
O:ASP99
|
4.5
|
83.6
|
1.0
|
|
CB
|
O:ASP97
|
4.5
|
74.0
|
1.0
|
|
C
|
O:ASP97
|
4.5
|
74.9
|
1.0
|
|
CG2
|
O:THR105
|
4.5
|
65.9
|
1.0
|
|
CB
|
O:TYR103
|
4.6
|
81.2
|
1.0
|
|
N
|
O:ALA98
|
4.8
|
77.3
|
1.0
|
|
CA
|
O:ASP99
|
4.8
|
86.2
|
1.0
|
|
CB
|
O:GLU108
|
4.8
|
62.7
|
1.0
|
|
OG1
|
O:THR105
|
4.8
|
61.3
|
1.0
|
|
C
|
O:LEU104
|
4.9
|
55.0
|
1.0
|
|
C
|
O:ASN101
|
4.9
|
83.3
|
1.0
|
|
N
|
O:GLY102
|
4.9
|
86.5
|
1.0
|
|
Reference:
R.Dominguez,
I.G.Lee.
Complex of CRACR2A with A Dynein Light Intermediate Chain Peptide To Be Published.
Page generated: Wed Jul 9 16:50:59 2025
|
