Atomistry » Calcium » PDB 6toz-6tz8 » 6ttg
Atomistry »
  Calcium »
    PDB 6toz-6tz8 »
      6ttg »

Calcium in PDB 6ttg: Crystal Structure of the Atp Binding Domain of S. Aureus Gyrb Complexed with LMD62

Enzymatic activity of Crystal Structure of the Atp Binding Domain of S. Aureus Gyrb Complexed with LMD62

All present enzymatic activity of Crystal Structure of the Atp Binding Domain of S. Aureus Gyrb Complexed with LMD62:
5.6.2.2;

Protein crystallography data

The structure of Crystal Structure of the Atp Binding Domain of S. Aureus Gyrb Complexed with LMD62, PDB code: 6ttg was solved by M.Welin, R.Kimbung, D.Focht, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 51.50 / 1.70
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 142.7, 55.36, 50.81, 90, 100.42, 90
R / Rfree (%) 18.6 / 21.1

Other elements in 6ttg:

The structure of Crystal Structure of the Atp Binding Domain of S. Aureus Gyrb Complexed with LMD62 also contains other interesting chemical elements:

Chlorine (Cl) 6 atoms

Calcium Binding Sites:

The binding sites of Calcium atom in the Crystal Structure of the Atp Binding Domain of S. Aureus Gyrb Complexed with LMD62 (pdb code 6ttg). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Crystal Structure of the Atp Binding Domain of S. Aureus Gyrb Complexed with LMD62, PDB code: 6ttg:

Calcium binding site 1 out of 1 in 6ttg

Go back to Calcium Binding Sites List in 6ttg
Calcium binding site 1 out of 1 in the Crystal Structure of the Atp Binding Domain of S. Aureus Gyrb Complexed with LMD62


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of the Atp Binding Domain of S. Aureus Gyrb Complexed with LMD62 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca306

b:100.7
occ:0.50
O A:HOH501 2.4 68.0 1.0
OD2 A:ASP57 2.4 47.8 1.0
O A:HOH474 2.5 61.3 1.0
CG A:ASP57 3.6 41.7 1.0
O A:HOH461 3.9 42.5 1.0
CB A:ASP57 4.2 38.6 1.0
OD1 A:ASN54 4.5 47.5 1.0
O4 A:NWK301 4.6 80.8 1.0
C19 A:NWK301 4.6 79.7 1.0
OD1 A:ASP57 4.6 44.0 1.0
OD2 A:ASP53 4.6 40.6 1.0
O A:HOH428 4.8 46.2 1.0

Reference:

M.Durcik, A.Nyerges, Z.Skok, T.Revesz, G.Draskovits, P.Szili, P.Tammela, M.Welin, R.Kimbung, D.Focht, J.Ilas, A.Zega, N.Zidar, D.Kikelj, C.Pal, L.Peterlin Masic, T.Tomasic. Structure-Based Design of Potent Dual Dna Gyrase and Topoisomerase IV Inhibitors with Broad Spectrum Antibacterial Activity To Be Published.
Page generated: Wed Jul 9 18:16:28 2025

Last articles

Fe in 2YXO
Fe in 2YRS
Fe in 2YXC
Fe in 2YNM
Fe in 2YVJ
Fe in 2YP1
Fe in 2YU2
Fe in 2YU1
Fe in 2YQB
Fe in 2YOO
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy