Calcium in PDB 6x5v: Peptide-Bound Structure of Marinomonas Primoryensis Peptide-Binding Domain
Protein crystallography data
The structure of Peptide-Bound Structure of Marinomonas Primoryensis Peptide-Binding Domain, PDB code: 6x5v
was solved by
S.Guo,
P.L.Davies,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
|
Resolution Low / High (Å)
|
52.48 /
1.60
|
|
Space group
|
P 1
|
|
Cell size a, b, c (Å), α, β, γ (°)
|
49.816,
61.598,
63.434,
118.96,
106,
93.32
|
|
R / Rfree (%)
|
19 /
22.2
|
Calcium Binding Sites:
Pages:
>>> Page 1 <<<
Page 2, Binding sites: 11 -
17;
Binding sites:
The binding sites of Calcium atom in the Peptide-Bound Structure of Marinomonas Primoryensis Peptide-Binding Domain
(pdb code 6x5v). This binding sites where shown within
5.0 Angstroms radius around Calcium atom.
In total 17 binding sites of Calcium where determined in the
Peptide-Bound Structure of Marinomonas Primoryensis Peptide-Binding Domain, PDB code: 6x5v:
Jump to Calcium binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
9;
10;
Calcium binding site 1 out
of 17 in 6x5v
Go back to
Calcium Binding Sites List in 6x5v
Calcium binding site 1 out
of 17 in the Peptide-Bound Structure of Marinomonas Primoryensis Peptide-Binding Domain
 Mono view
 Stereo pair view
|
|
A full contact list of Calcium with other atoms in the Ca binding
site number 1 of Peptide-Bound Structure of Marinomonas Primoryensis Peptide-Binding Domain within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Ca4204
b:19.1
occ:1.00
|
O
|
A:ARG161
|
2.3
|
18.2
|
1.0
|
|
OD1
|
A:ASP191
|
2.3
|
17.2
|
1.0
|
|
OD2
|
A:ASP492
|
2.4
|
19.5
|
1.0
|
|
OE2
|
A:GLU116
|
2.5
|
20.3
|
1.0
|
|
OD1
|
A:ASP426
|
2.5
|
18.6
|
1.0
|
|
OE1
|
A:GLU116
|
2.6
|
18.8
|
1.0
|
|
OD2
|
A:ASP426
|
2.6
|
18.4
|
1.0
|
|
ND1
|
A:HIS163
|
2.6
|
17.9
|
1.0
|
|
CG
|
A:ASP426
|
2.8
|
17.6
|
1.0
|
|
CD
|
A:GLU116
|
2.9
|
19.9
|
1.0
|
|
H
|
A:HIS163
|
3.3
|
20.1
|
1.0
|
|
HE1
|
A:HIS163
|
3.3
|
22.2
|
1.0
|
|
CE1
|
A:HIS163
|
3.4
|
18.5
|
1.0
|
|
CG
|
A:ASP191
|
3.4
|
20.1
|
1.0
|
|
CG
|
A:ASP492
|
3.5
|
22.3
|
1.0
|
|
HA
|
A:ASP191
|
3.5
|
25.7
|
1.0
|
|
C
|
A:ARG161
|
3.5
|
20.3
|
1.0
|
|
H
|
A:ARG161
|
3.6
|
23.9
|
1.0
|
|
HB2
|
A:HIS163
|
3.6
|
22.6
|
1.0
|
|
H
|
A:SER192
|
3.6
|
22.2
|
1.0
|
|
CG
|
A:HIS163
|
3.7
|
18.5
|
1.0
|
|
OD1
|
A:ASP492
|
3.8
|
21.0
|
1.0
|
|
CA
|
A:CA4205
|
3.8
|
19.7
|
1.0
|
|
HG13
|
A:VAL160
|
4.0
|
28.6
|
1.0
|
|
N
|
A:HIS163
|
4.0
|
16.8
|
1.0
|
|
HA
|
A:ASP162
|
4.1
|
23.4
|
1.0
|
|
CB
|
A:HIS163
|
4.1
|
18.8
|
1.0
|
|
HG
|
A:SER192
|
4.2
|
27.9
|
1.0
|
|
N
|
A:ARG161
|
4.2
|
19.9
|
1.0
|
|
CB
|
A:ASP191
|
4.2
|
21.4
|
1.0
|
|
CA
|
A:ASP191
|
4.3
|
21.4
|
1.0
|
|
HB2
|
A:ARG161
|
4.3
|
25.3
|
1.0
|
|
HB2
|
A:ASP191
|
4.3
|
25.6
|
1.0
|
|
CB
|
A:ASP426
|
4.3
|
20.4
|
1.0
|
|
OD2
|
A:ASP191
|
4.4
|
21.1
|
1.0
|
|
CG
|
A:GLU116
|
4.4
|
19.9
|
1.0
|
|
CA
|
A:ARG161
|
4.4
|
21.4
|
1.0
|
|
O
|
A:HOH4480
|
4.4
|
22.8
|
1.0
|
|
N
|
A:SER192
|
4.4
|
18.5
|
1.0
|
|
N
|
A:ASP162
|
4.5
|
19.6
|
1.0
|
|
NE2
|
A:HIS163
|
4.6
|
17.6
|
1.0
|
|
CA
|
A:ASP162
|
4.6
|
19.5
|
1.0
|
|
HB3
|
A:ASP426
|
4.7
|
24.5
|
1.0
|
|
HB3
|
A:ASP492
|
4.7
|
24.7
|
1.0
|
|
CB
|
A:ASP492
|
4.7
|
20.6
|
1.0
|
|
HG2
|
A:GLU116
|
4.7
|
23.9
|
1.0
|
|
CA
|
A:HIS163
|
4.7
|
18.9
|
1.0
|
|
C
|
A:ASP162
|
4.8
|
17.7
|
1.0
|
|
CD2
|
A:HIS163
|
4.8
|
17.7
|
1.0
|
|
HB2
|
A:ASP426
|
4.8
|
24.5
|
1.0
|
|
O
|
A:SER192
|
4.8
|
19.6
|
1.0
|
|
HG3
|
A:GLU116
|
4.8
|
23.9
|
1.0
|
|
CG1
|
A:VAL160
|
4.8
|
23.8
|
1.0
|
|
HG12
|
A:VAL160
|
4.9
|
28.6
|
1.0
|
|
CB
|
A:ARG161
|
4.9
|
21.1
|
1.0
|
|
C
|
A:ASP191
|
4.9
|
22.2
|
1.0
|
|
HA
|
A:ASP426
|
4.9
|
26.6
|
1.0
|
|
OG
|
A:SER192
|
4.9
|
23.2
|
1.0
|
|
HB3
|
A:GLU116
|
5.0
|
23.0
|
1.0
|
|
HB3
|
A:HIS163
|
5.0
|
22.6
|
1.0
|
|
Calcium binding site 2 out
of 17 in 6x5v
Go back to
Calcium Binding Sites List in 6x5v
Calcium binding site 2 out
of 17 in the Peptide-Bound Structure of Marinomonas Primoryensis Peptide-Binding Domain
 Mono view
 Stereo pair view
|
|
A full contact list of Calcium with other atoms in the Ca binding
site number 2 of Peptide-Bound Structure of Marinomonas Primoryensis Peptide-Binding Domain within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Ca4205
b:19.7
occ:1.00
|
OD2
|
A:ASP426
|
2.3
|
18.4
|
1.0
|
|
OD1
|
A:ASP492
|
2.3
|
21.0
|
1.0
|
|
O
|
A:SER192
|
2.3
|
19.6
|
1.0
|
|
OG
|
A:SER494
|
2.4
|
21.5
|
1.0
|
|
OD2
|
A:ASP490
|
2.5
|
19.8
|
1.0
|
|
OD1
|
A:ASP191
|
2.5
|
17.2
|
1.0
|
|
OD2
|
A:ASP191
|
2.6
|
21.1
|
1.0
|
|
CG
|
A:ASP191
|
2.8
|
20.1
|
1.0
|
|
OD1
|
A:ASP490
|
3.1
|
20.2
|
1.0
|
|
CG
|
A:ASP490
|
3.2
|
21.5
|
1.0
|
|
HB2
|
A:SER494
|
3.2
|
24.4
|
1.0
|
|
CG
|
A:ASP492
|
3.3
|
22.3
|
1.0
|
|
CB
|
A:SER494
|
3.4
|
20.3
|
1.0
|
|
CG
|
A:ASP426
|
3.5
|
17.6
|
1.0
|
|
C
|
A:SER192
|
3.6
|
20.0
|
1.0
|
|
H
|
A:SER494
|
3.6
|
22.7
|
1.0
|
|
OD2
|
A:ASP492
|
3.6
|
19.5
|
1.0
|
|
HA
|
A:ALA193
|
3.7
|
22.0
|
1.0
|
|
H
|
A:SER192
|
3.8
|
22.2
|
1.0
|
|
CA
|
A:CA4204
|
3.8
|
19.1
|
1.0
|
|
HB2
|
A:ASP426
|
3.9
|
24.5
|
1.0
|
|
HB3
|
A:SER494
|
4.0
|
24.4
|
1.0
|
|
H
|
A:ASP492
|
4.1
|
23.9
|
1.0
|
|
O
|
A:HOH4398
|
4.1
|
34.2
|
1.0
|
|
N
|
A:SER192
|
4.2
|
18.5
|
1.0
|
|
CB
|
A:ASP426
|
4.2
|
20.4
|
1.0
|
|
N
|
A:SER494
|
4.3
|
18.9
|
1.0
|
|
CB
|
A:ASP191
|
4.3
|
21.4
|
1.0
|
|
OE2
|
A:GLU116
|
4.3
|
20.3
|
1.0
|
|
HG
|
A:SER192
|
4.4
|
27.9
|
1.0
|
|
OD1
|
A:ASP426
|
4.4
|
18.6
|
1.0
|
|
N
|
A:ALA193
|
4.4
|
19.0
|
1.0
|
|
CA
|
A:SER494
|
4.4
|
18.7
|
1.0
|
|
CA
|
A:ALA193
|
4.5
|
18.3
|
1.0
|
|
CA
|
A:SER192
|
4.5
|
20.2
|
1.0
|
|
HB3
|
A:ASP426
|
4.6
|
24.5
|
1.0
|
|
CB
|
A:ASP490
|
4.6
|
20.6
|
1.0
|
|
HB2
|
A:ALA193
|
4.6
|
22.6
|
1.0
|
|
HB3
|
A:ASP191
|
4.6
|
25.6
|
1.0
|
|
O
|
A:HOH4359
|
4.7
|
33.3
|
1.0
|
|
CB
|
A:ASP492
|
4.7
|
20.6
|
1.0
|
|
OG
|
A:SER192
|
4.7
|
23.2
|
1.0
|
|
HB2
|
A:HIS163
|
4.7
|
22.6
|
1.0
|
|
HD3
|
A:PRO194
|
4.7
|
26.1
|
1.0
|
|
HB2
|
A:ASP490
|
4.8
|
24.8
|
1.0
|
|
N
|
A:ASP492
|
4.8
|
19.9
|
1.0
|
|
C
|
A:ASP191
|
4.8
|
22.2
|
1.0
|
|
HA
|
A:ASP191
|
4.8
|
25.7
|
1.0
|
|
HB2
|
A:ASP191
|
4.8
|
25.6
|
1.0
|
|
C
|
A:ASP492
|
4.9
|
18.2
|
1.0
|
|
HA
|
A:SER494
|
4.9
|
22.5
|
1.0
|
|
HB3
|
A:ASP490
|
4.9
|
24.8
|
1.0
|
|
CA
|
A:ASP191
|
5.0
|
21.4
|
1.0
|
|
Calcium binding site 3 out
of 17 in 6x5v
Go back to
Calcium Binding Sites List in 6x5v
Calcium binding site 3 out
of 17 in the Peptide-Bound Structure of Marinomonas Primoryensis Peptide-Binding Domain
 Mono view
 Stereo pair view
|
|
A full contact list of Calcium with other atoms in the Ca binding
site number 3 of Peptide-Bound Structure of Marinomonas Primoryensis Peptide-Binding Domain within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Ca4206
b:19.1
occ:1.00
|
O
|
A:VAL167
|
2.3
|
21.2
|
1.0
|
|
O
|
A:HOH4466
|
2.3
|
21.6
|
1.0
|
|
OD1
|
A:ASP165
|
2.3
|
21.1
|
1.0
|
|
O
|
A:ASP162
|
2.4
|
19.9
|
1.0
|
|
OD1
|
A:ASP169
|
2.5
|
17.3
|
1.0
|
|
O
|
A:HOH4510
|
2.6
|
18.1
|
1.0
|
|
OD2
|
A:ASP169
|
2.7
|
19.5
|
1.0
|
|
CG
|
A:ASP169
|
2.9
|
21.6
|
1.0
|
|
CG
|
A:ASP165
|
3.3
|
23.1
|
1.0
|
|
HA
|
A:HIS163
|
3.4
|
22.6
|
1.0
|
|
C
|
A:VAL167
|
3.4
|
24.1
|
1.0
|
|
HB
|
A:VAL167
|
3.4
|
31.8
|
1.0
|
|
H
|
A:VAL167
|
3.5
|
27.8
|
1.0
|
|
C
|
A:ASP162
|
3.5
|
17.7
|
1.0
|
|
OD2
|
A:ASP165
|
3.7
|
24.1
|
1.0
|
|
H
|
A:ASP165
|
3.7
|
29.4
|
1.0
|
|
HB3
|
A:ARG161
|
4.0
|
25.3
|
1.0
|
|
N
|
A:VAL167
|
4.1
|
23.2
|
1.0
|
|
HH21
|
A:ARG161
|
4.1
|
25.3
|
1.0
|
|
CA
|
A:VAL167
|
4.1
|
24.6
|
1.0
|
|
HE
|
A:ARG161
|
4.2
|
23.6
|
1.0
|
|
CB
|
A:VAL167
|
4.2
|
26.5
|
1.0
|
|
CA
|
A:HIS163
|
4.2
|
18.9
|
1.0
|
|
HB3
|
A:ASP162
|
4.2
|
25.1
|
1.0
|
|
CB
|
A:ASP169
|
4.3
|
22.8
|
1.0
|
|
N
|
A:HIS163
|
4.3
|
16.8
|
1.0
|
|
C
|
A:SER168
|
4.3
|
20.9
|
1.0
|
|
HG12
|
A:VAL167
|
4.3
|
31.9
|
1.0
|
|
O
|
A:HOH4335
|
4.4
|
37.7
|
1.0
|
|
O
|
A:SER168
|
4.4
|
21.2
|
1.0
|
|
N
|
A:ASP165
|
4.4
|
24.5
|
1.0
|
|
O
|
A:ASP165
|
4.5
|
19.9
|
1.0
|
|
N
|
A:ASP169
|
4.5
|
21.0
|
1.0
|
|
N
|
A:SER168
|
4.5
|
23.0
|
1.0
|
|
CB
|
A:ASP165
|
4.6
|
23.9
|
1.0
|
|
H
|
A:ASP162
|
4.6
|
23.5
|
1.0
|
|
CA
|
A:ASP162
|
4.6
|
19.5
|
1.0
|
|
C
|
A:ASP165
|
4.6
|
21.6
|
1.0
|
|
C
|
A:HIS163
|
4.6
|
19.9
|
1.0
|
|
HA
|
A:SER168
|
4.7
|
27.4
|
1.0
|
|
HA
|
A:ASP169
|
4.7
|
27.4
|
1.0
|
|
N
|
A:ASP162
|
4.7
|
19.6
|
1.0
|
|
HB2
|
A:ASP169
|
4.7
|
27.4
|
1.0
|
|
NH2
|
A:ARG161
|
4.7
|
21.1
|
1.0
|
|
CA
|
A:ASP165
|
4.8
|
23.7
|
1.0
|
|
H
|
A:ASP169
|
4.8
|
25.2
|
1.0
|
|
O
|
A:HOH4658
|
4.8
|
22.4
|
1.0
|
|
CA
|
A:SER168
|
4.8
|
22.9
|
1.0
|
|
CA
|
A:ASP169
|
4.8
|
22.8
|
1.0
|
|
HB3
|
A:ASP169
|
4.8
|
27.4
|
1.0
|
|
NE
|
A:ARG161
|
4.8
|
19.6
|
1.0
|
|
CG1
|
A:VAL167
|
4.8
|
26.6
|
1.0
|
|
H
|
A:GLY164
|
4.8
|
25.0
|
1.0
|
|
CB
|
A:ASP162
|
4.9
|
20.9
|
1.0
|
|
N
|
A:GLY164
|
4.9
|
20.8
|
1.0
|
|
HB3
|
A:ASP165
|
5.0
|
28.6
|
1.0
|
|
CB
|
A:ARG161
|
5.0
|
21.1
|
1.0
|
|
Calcium binding site 4 out
of 17 in 6x5v
Go back to
Calcium Binding Sites List in 6x5v
Calcium binding site 4 out
of 17 in the Peptide-Bound Structure of Marinomonas Primoryensis Peptide-Binding Domain
 Mono view
 Stereo pair view
|
|
A full contact list of Calcium with other atoms in the Ca binding
site number 4 of Peptide-Bound Structure of Marinomonas Primoryensis Peptide-Binding Domain within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Ca4207
b:20.9
occ:1.00
|
O
|
A:VAL197
|
2.3
|
23.5
|
1.0
|
|
O
|
A:ILE412
|
2.4
|
20.7
|
1.0
|
|
OD1
|
A:ASP421
|
2.4
|
20.2
|
1.0
|
|
OD2
|
A:ASP199
|
2.4
|
20.4
|
1.0
|
|
OD1
|
A:ASP199
|
2.4
|
22.5
|
1.0
|
|
OH
|
A:TYR486
|
2.4
|
20.9
|
1.0
|
|
O
|
A:HOH4355
|
2.5
|
23.1
|
1.0
|
|
CG
|
A:ASP199
|
2.7
|
21.9
|
1.0
|
|
CG
|
A:ASP421
|
3.3
|
19.8
|
1.0
|
|
HB
|
A:ILE412
|
3.3
|
26.5
|
1.0
|
|
H
|
A:VAL197
|
3.3
|
24.0
|
1.0
|
|
C
|
A:VAL197
|
3.5
|
23.4
|
1.0
|
|
C
|
A:ILE412
|
3.5
|
21.6
|
1.0
|
|
OD2
|
A:ASP421
|
3.6
|
20.5
|
1.0
|
|
CZ
|
A:TYR486
|
3.6
|
21.6
|
1.0
|
|
HE2
|
A:TYR486
|
3.7
|
25.7
|
1.0
|
|
HB
|
A:VAL197
|
3.7
|
27.4
|
1.0
|
|
HA
|
A:ILE412
|
3.9
|
24.6
|
1.0
|
|
H
|
A:ASP421
|
4.0
|
29.6
|
1.0
|
|
N
|
A:VAL197
|
4.0
|
20.0
|
1.0
|
|
HD22
|
A:ASN416
|
4.0
|
32.7
|
1.0
|
|
CE2
|
A:TYR486
|
4.1
|
21.4
|
1.0
|
|
CA
|
A:ILE412
|
4.1
|
20.5
|
1.0
|
|
CB
|
A:ILE412
|
4.1
|
22.1
|
1.0
|
|
CB
|
A:ASP199
|
4.2
|
21.5
|
1.0
|
|
CA
|
A:VAL197
|
4.2
|
20.6
|
1.0
|
|
HA
|
A:PHE413
|
4.2
|
28.0
|
1.0
|
|
HD13
|
A:ILE412
|
4.3
|
25.1
|
1.0
|
|
C
|
A:ASP198
|
4.4
|
24.4
|
1.0
|
|
O
|
A:ASP414
|
4.4
|
25.3
|
1.0
|
|
CB
|
A:VAL197
|
4.4
|
22.9
|
1.0
|
|
O
|
A:ASP198
|
4.5
|
24.8
|
1.0
|
|
HB3
|
A:ALA498
|
4.5
|
25.0
|
1.0
|
|
N
|
A:ASP199
|
4.5
|
21.6
|
1.0
|
|
N
|
A:ASP198
|
4.5
|
24.1
|
1.0
|
|
N
|
A:ASP421
|
4.6
|
24.7
|
1.0
|
|
CB
|
A:ASP421
|
4.6
|
22.3
|
1.0
|
|
HB2
|
A:ASP199
|
4.6
|
25.8
|
1.0
|
|
N
|
A:PHE413
|
4.6
|
21.7
|
1.0
|
|
HA
|
A:ASP198
|
4.6
|
28.7
|
1.0
|
|
HG22
|
A:ILE412
|
4.7
|
30.8
|
1.0
|
|
HB3
|
A:ASP199
|
4.7
|
25.8
|
1.0
|
|
HA
|
A:ASP199
|
4.7
|
28.8
|
1.0
|
|
CE1
|
A:TYR486
|
4.7
|
20.9
|
1.0
|
|
CA
|
A:ASP199
|
4.7
|
24.0
|
1.0
|
|
ND2
|
A:ASN416
|
4.8
|
27.2
|
1.0
|
|
CA
|
A:ASP198
|
4.8
|
23.9
|
1.0
|
|
HB1
|
A:ALA498
|
4.8
|
25.0
|
1.0
|
|
HB1
|
A:ALA196
|
4.8
|
27.7
|
1.0
|
|
H
|
A:ASP199
|
4.8
|
25.9
|
1.0
|
|
CA
|
A:PHE413
|
4.8
|
23.3
|
1.0
|
|
O
|
A:GLY419
|
4.8
|
29.4
|
1.0
|
|
HG12
|
A:VAL197
|
4.8
|
30.1
|
1.0
|
|
HA
|
A:ALA196
|
4.8
|
26.2
|
1.0
|
|
HE1
|
A:TYR486
|
4.9
|
25.0
|
1.0
|
|
HB2
|
A:ASP421
|
4.9
|
26.8
|
1.0
|
|
O
|
A:HOH4438
|
4.9
|
28.8
|
1.0
|
|
HA
|
A:ASP421
|
4.9
|
27.1
|
1.0
|
|
HA
|
A:ALA420
|
5.0
|
31.6
|
1.0
|
|
CG2
|
A:ILE412
|
5.0
|
25.6
|
1.0
|
|
CA
|
A:ASP421
|
5.0
|
22.6
|
1.0
|
|
Calcium binding site 5 out
of 17 in 6x5v
Go back to
Calcium Binding Sites List in 6x5v
Calcium binding site 5 out
of 17 in the Peptide-Bound Structure of Marinomonas Primoryensis Peptide-Binding Domain
 Mono view
 Stereo pair view
|
|
A full contact list of Calcium with other atoms in the Ca binding
site number 5 of Peptide-Bound Structure of Marinomonas Primoryensis Peptide-Binding Domain within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Ca4208
b:24.1
occ:1.00
|
OD1
|
A:ASN290
|
2.3
|
22.7
|
1.0
|
|
OE2
|
A:GLU330
|
2.4
|
22.1
|
1.0
|
|
O
|
A:TYR291
|
2.4
|
24.0
|
1.0
|
|
OXT
|
B:SER1519
|
2.4
|
24.0
|
1.0
|
|
OE1
|
A:GLU385
|
2.4
|
25.1
|
1.0
|
|
O
|
B:SER1519
|
2.5
|
24.3
|
1.0
|
|
OD2
|
A:ASP342
|
2.6
|
24.8
|
1.0
|
|
OE2
|
A:GLU385
|
2.6
|
24.8
|
1.0
|
|
CD
|
A:GLU385
|
2.8
|
25.9
|
1.0
|
|
C
|
B:SER1519
|
2.9
|
23.3
|
1.0
|
|
HG3
|
A:GLU330
|
3.2
|
27.0
|
1.0
|
|
HG
|
A:SER260
|
3.3
|
28.5
|
1.0
|
|
CD
|
A:GLU330
|
3.3
|
23.1
|
1.0
|
|
CG
|
A:ASN290
|
3.4
|
21.5
|
1.0
|
|
HA
|
A:PRO292
|
3.4
|
30.6
|
1.0
|
|
C
|
A:TYR291
|
3.4
|
22.8
|
1.0
|
|
HD21
|
A:ASN290
|
3.5
|
26.7
|
1.0
|
|
CG
|
A:ASP342
|
3.5
|
23.9
|
1.0
|
|
HD21
|
A:ASN333
|
3.6
|
31.4
|
1.0
|
|
OD1
|
A:ASP342
|
3.8
|
23.7
|
1.0
|
|
CG
|
A:GLU330
|
3.8
|
22.5
|
1.0
|
|
ND2
|
A:ASN290
|
3.8
|
22.2
|
1.0
|
|
CA
|
A:CA4209
|
3.9
|
26.2
|
1.0
|
|
H
|
A:VAL293
|
4.0
|
31.2
|
1.0
|
|
OG
|
A:SER260
|
4.0
|
23.8
|
1.0
|
|
HG22
|
A:VAL293
|
4.0
|
30.7
|
1.0
|
|
O
|
A:HOH4381
|
4.1
|
23.5
|
1.0
|
|
N
|
A:PRO292
|
4.1
|
24.4
|
1.0
|
|
CA
|
A:PRO292
|
4.1
|
25.5
|
1.0
|
|
HG2
|
A:GLU330
|
4.2
|
27.0
|
1.0
|
|
H
|
A:TYR291
|
4.2
|
26.8
|
1.0
|
|
N
|
A:TYR291
|
4.2
|
22.4
|
1.0
|
|
HA
|
A:GLU385
|
4.3
|
27.8
|
1.0
|
|
OE1
|
A:GLU330
|
4.3
|
23.0
|
1.0
|
|
CG
|
A:GLU385
|
4.3
|
27.7
|
1.0
|
|
CA
|
B:SER1519
|
4.4
|
26.8
|
1.0
|
|
HA
|
A:ASN290
|
4.4
|
27.6
|
1.0
|
|
CA
|
A:TYR291
|
4.4
|
21.2
|
1.0
|
|
ND2
|
A:ASN333
|
4.5
|
26.1
|
1.0
|
|
C
|
A:ASN290
|
4.6
|
22.3
|
1.0
|
|
N
|
A:VAL293
|
4.6
|
26.0
|
1.0
|
|
HD22
|
A:ASN290
|
4.6
|
26.7
|
1.0
|
|
CB
|
A:ASN290
|
4.6
|
21.3
|
1.0
|
|
HG13
|
A:VAL293
|
4.7
|
29.9
|
1.0
|
|
HA
|
A:GLU330
|
4.7
|
29.9
|
1.0
|
|
HB2
|
A:ASP342
|
4.7
|
25.1
|
1.0
|
|
OD1
|
A:ASN333
|
4.7
|
26.7
|
1.0
|
|
CB
|
A:ASP342
|
4.8
|
20.9
|
1.0
|
|
HG2
|
A:GLU385
|
4.8
|
33.3
|
1.0
|
|
CA
|
A:ASN290
|
4.8
|
23.0
|
1.0
|
|
HA
|
B:SER1519
|
4.8
|
32.2
|
1.0
|
|
HG3
|
A:GLU385
|
4.8
|
33.3
|
1.0
|
|
C
|
A:PRO292
|
4.8
|
25.7
|
1.0
|
|
HB3
|
A:GLU385
|
4.9
|
31.6
|
1.0
|
|
HB3
|
B:SER1519
|
4.9
|
35.4
|
1.0
|
|
HA
|
A:TYR291
|
4.9
|
25.4
|
1.0
|
|
H
|
B:SER1519
|
5.0
|
34.8
|
1.0
|
|
CG2
|
A:VAL293
|
5.0
|
25.6
|
1.0
|
|
Calcium binding site 6 out
of 17 in 6x5v
Go back to
Calcium Binding Sites List in 6x5v
Calcium binding site 6 out
of 17 in the Peptide-Bound Structure of Marinomonas Primoryensis Peptide-Binding Domain
 Mono view
 Stereo pair view
|
|
A full contact list of Calcium with other atoms in the Ca binding
site number 6 of Peptide-Bound Structure of Marinomonas Primoryensis Peptide-Binding Domain within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Ca4209
b:26.2
occ:1.00
|
OD1
|
A:ASP342
|
2.3
|
23.7
|
1.0
|
|
OE2
|
A:GLU385
|
2.3
|
24.8
|
1.0
|
|
OXT
|
B:SER1519
|
2.3
|
24.0
|
1.0
|
|
O
|
A:THR331
|
2.3
|
28.6
|
1.0
|
|
OD1
|
A:ASN333
|
2.4
|
26.7
|
1.0
|
|
O
|
A:SER340
|
2.4
|
26.6
|
1.0
|
|
OG1
|
A:THR331
|
2.7
|
26.6
|
1.0
|
|
H
|
A:THR331
|
3.0
|
38.1
|
1.0
|
|
CD
|
A:GLU385
|
3.2
|
25.9
|
1.0
|
|
HG1
|
A:THR331
|
3.2
|
31.9
|
1.0
|
|
C
|
A:THR331
|
3.3
|
30.8
|
1.0
|
|
CG
|
A:ASP342
|
3.3
|
23.9
|
1.0
|
|
C
|
B:SER1519
|
3.4
|
23.3
|
1.0
|
|
N
|
A:THR331
|
3.4
|
31.8
|
1.0
|
|
CG
|
A:ASN333
|
3.5
|
25.7
|
1.0
|
|
C
|
A:SER340
|
3.5
|
28.3
|
1.0
|
|
HA
|
B:SER1519
|
3.6
|
32.2
|
1.0
|
|
CA
|
A:THR331
|
3.7
|
31.0
|
1.0
|
|
HG2
|
A:GLU385
|
3.8
|
33.3
|
1.0
|
|
CB
|
A:THR331
|
3.8
|
28.3
|
1.0
|
|
OD2
|
A:ASP342
|
3.8
|
24.8
|
1.0
|
|
HD21
|
A:ASN333
|
3.8
|
31.4
|
1.0
|
|
HD21
|
A:ASN290
|
3.8
|
26.7
|
1.0
|
|
HA
|
A:SER340
|
3.8
|
36.0
|
1.0
|
|
HB3
|
A:SER340
|
3.8
|
37.4
|
1.0
|
|
CA
|
A:CA4208
|
3.9
|
24.1
|
1.0
|
|
CG
|
A:GLU385
|
4.0
|
27.7
|
1.0
|
|
OE1
|
A:GLU385
|
4.0
|
25.1
|
1.0
|
|
CA
|
B:SER1519
|
4.0
|
26.8
|
1.0
|
|
ND2
|
A:ASN333
|
4.1
|
26.1
|
1.0
|
|
HG3
|
A:GLU385
|
4.1
|
33.3
|
1.0
|
|
HG3
|
A:GLU330
|
4.1
|
27.0
|
1.0
|
|
HA
|
A:ASN333
|
4.1
|
38.7
|
1.0
|
|
CA
|
A:SER340
|
4.1
|
30.0
|
1.0
|
|
HB3
|
B:SER1519
|
4.2
|
35.4
|
1.0
|
|
C
|
A:ARG341
|
4.2
|
27.8
|
1.0
|
|
O
|
A:ARG341
|
4.2
|
27.5
|
1.0
|
|
C
|
A:GLU330
|
4.3
|
28.6
|
1.0
|
|
N
|
A:ASP342
|
4.3
|
24.4
|
1.0
|
|
HB
|
A:THR331
|
4.3
|
33.9
|
1.0
|
|
O
|
B:SER1519
|
4.3
|
24.3
|
1.0
|
|
HA
|
A:ASP342
|
4.4
|
26.7
|
1.0
|
|
HA
|
A:GLU330
|
4.4
|
29.9
|
1.0
|
|
C
|
A:PRO332
|
4.5
|
32.8
|
1.0
|
|
O
|
A:PRO332
|
4.5
|
31.9
|
1.0
|
|
CB
|
A:SER340
|
4.5
|
31.2
|
1.0
|
|
N
|
A:PRO332
|
4.5
|
33.3
|
1.0
|
|
CB
|
A:ASP342
|
4.5
|
20.9
|
1.0
|
|
N
|
A:ASN333
|
4.5
|
32.5
|
1.0
|
|
N
|
A:ARG341
|
4.5
|
26.9
|
1.0
|
|
H
|
A:ASP342
|
4.6
|
29.2
|
1.0
|
|
HA
|
A:THR331
|
4.6
|
37.2
|
1.0
|
|
ND2
|
A:ASN290
|
4.6
|
22.2
|
1.0
|
|
CA
|
A:ASN333
|
4.6
|
32.2
|
1.0
|
|
CA
|
A:ASP342
|
4.7
|
22.3
|
1.0
|
|
CB
|
A:ASN333
|
4.7
|
28.6
|
1.0
|
|
HG23
|
A:THR331
|
4.7
|
33.2
|
1.0
|
|
HA
|
A:ARG341
|
4.7
|
33.2
|
1.0
|
|
CB
|
B:SER1519
|
4.7
|
29.5
|
1.0
|
|
CA
|
A:ARG341
|
4.8
|
27.7
|
1.0
|
|
CG2
|
A:THR331
|
4.8
|
27.6
|
1.0
|
|
HD22
|
A:ASN333
|
4.9
|
31.4
|
1.0
|
|
H
|
A:ASN333
|
4.9
|
39.1
|
1.0
|
|
CA
|
A:GLU330
|
4.9
|
24.9
|
1.0
|
|
CA
|
A:PRO332
|
4.9
|
35.8
|
1.0
|
|
HA
|
A:PRO332
|
5.0
|
43.0
|
1.0
|
|
HB2
|
A:ASP342
|
5.0
|
25.1
|
1.0
|
|
Calcium binding site 7 out
of 17 in 6x5v
Go back to
Calcium Binding Sites List in 6x5v
Calcium binding site 7 out
of 17 in the Peptide-Bound Structure of Marinomonas Primoryensis Peptide-Binding Domain
 Mono view
 Stereo pair view
|
|
A full contact list of Calcium with other atoms in the Ca binding
site number 7 of Peptide-Bound Structure of Marinomonas Primoryensis Peptide-Binding Domain within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Ca4210
b:30.2
occ:1.00
|
O
|
A:ASP243
|
2.3
|
31.7
|
1.0
|
|
O
|
A:HOH4389
|
2.4
|
26.9
|
1.0
|
|
O
|
A:HOH4644
|
2.4
|
35.0
|
1.0
|
|
OD1
|
A:ASP241
|
2.4
|
27.0
|
1.0
|
|
O
|
A:HOH4549
|
2.4
|
40.3
|
1.0
|
|
OD2
|
A:ASP232
|
2.5
|
29.5
|
1.0
|
|
O
|
A:ASP241
|
2.5
|
37.0
|
1.0
|
|
OD1
|
A:ASP232
|
2.7
|
28.8
|
1.0
|
|
CG
|
A:ASP232
|
2.9
|
29.8
|
1.0
|
|
H
|
A:ASP241
|
3.0
|
40.6
|
1.0
|
|
H
|
A:ASP243
|
3.1
|
41.2
|
1.0
|
|
C
|
A:ASP241
|
3.3
|
36.1
|
1.0
|
|
C
|
A:ASP243
|
3.4
|
33.4
|
1.0
|
|
CG
|
A:ASP241
|
3.6
|
29.1
|
1.0
|
|
N
|
A:ASP243
|
3.7
|
34.3
|
1.0
|
|
N
|
A:ASP241
|
3.8
|
33.9
|
1.0
|
|
CA
|
A:CA4211
|
3.9
|
25.6
|
1.0
|
|
HA
|
A:SER244
|
4.0
|
38.3
|
1.0
|
|
CA
|
A:ASP241
|
4.0
|
34.0
|
1.0
|
|
CA
|
A:ASP243
|
4.2
|
34.1
|
1.0
|
|
N
|
A:ASN242
|
4.2
|
37.0
|
1.0
|
|
CB
|
A:ASP241
|
4.4
|
31.8
|
1.0
|
|
CB
|
A:ASP232
|
4.4
|
31.6
|
1.0
|
|
C
|
A:ASN242
|
4.5
|
38.7
|
1.0
|
|
N
|
A:SER244
|
4.5
|
32.3
|
1.0
|
|
O
|
A:HOH4340
|
4.5
|
26.8
|
1.0
|
|
OD2
|
A:ASP241
|
4.5
|
27.5
|
1.0
|
|
O
|
A:HOH4375
|
4.5
|
34.7
|
1.0
|
|
HA
|
A:ASN242
|
4.6
|
45.3
|
1.0
|
|
O
|
A:GLY233
|
4.6
|
26.7
|
1.0
|
|
OD1
|
A:ASP243
|
4.6
|
28.2
|
1.0
|
|
HA
|
A:VAL240
|
4.7
|
41.7
|
1.0
|
|
H
|
A:GLY233
|
4.7
|
32.3
|
1.0
|
|
CA
|
A:ASN242
|
4.7
|
37.7
|
1.0
|
|
CA
|
A:SER244
|
4.7
|
31.9
|
1.0
|
|
O
|
A:HOH4383
|
4.7
|
47.2
|
1.0
|
|
HA
|
A:ASP243
|
4.8
|
41.0
|
1.0
|
|
HB3
|
A:ASP232
|
4.8
|
37.9
|
1.0
|
|
HB
|
A:VAL240
|
4.8
|
49.1
|
1.0
|
|
HB2
|
A:ASP232
|
4.8
|
37.9
|
1.0
|
|
H
|
A:ASN242
|
4.8
|
44.4
|
1.0
|
|
HA
|
A:ASP241
|
4.9
|
40.7
|
1.0
|
|
C
|
A:VAL240
|
5.0
|
33.7
|
1.0
|
|
HB3
|
A:ASP241
|
5.0
|
38.1
|
1.0
|
|
Calcium binding site 8 out
of 17 in 6x5v
Go back to
Calcium Binding Sites List in 6x5v
Calcium binding site 8 out
of 17 in the Peptide-Bound Structure of Marinomonas Primoryensis Peptide-Binding Domain
 Mono view
 Stereo pair view
|
|
A full contact list of Calcium with other atoms in the Ca binding
site number 8 of Peptide-Bound Structure of Marinomonas Primoryensis Peptide-Binding Domain within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Ca4211
b:25.6
occ:1.00
|
OD1
|
A:ASP232
|
2.2
|
28.8
|
1.0
|
|
OD1
|
A:ASP243
|
2.3
|
28.2
|
1.0
|
|
OD2
|
A:ASP247
|
2.4
|
24.8
|
1.0
|
|
OD2
|
A:ASP241
|
2.4
|
27.5
|
1.0
|
|
O
|
A:ALA245
|
2.4
|
27.0
|
1.0
|
|
O
|
A:HOH4352
|
2.5
|
25.5
|
1.0
|
|
OD1
|
A:ASP241
|
2.5
|
27.0
|
1.0
|
|
CG
|
A:ASP241
|
2.8
|
29.1
|
1.0
|
|
O
|
A:ASP243
|
3.2
|
31.7
|
1.0
|
|
CG
|
A:ASP247
|
3.3
|
21.6
|
1.0
|
|
HB3
|
A:ASP247
|
3.4
|
27.7
|
1.0
|
|
C
|
A:ALA245
|
3.4
|
25.1
|
1.0
|
|
CG
|
A:ASP232
|
3.4
|
29.8
|
1.0
|
|
H
|
A:ASP247
|
3.5
|
25.4
|
1.0
|
|
CG
|
A:ASP243
|
3.5
|
30.7
|
1.0
|
|
HA
|
A:ASP232
|
3.6
|
36.1
|
1.0
|
|
HB3
|
A:ALA245
|
3.7
|
33.9
|
1.0
|
|
H
|
A:ALA245
|
3.7
|
32.5
|
1.0
|
|
N
|
A:ALA245
|
3.7
|
27.1
|
1.0
|
|
C
|
A:ASP243
|
3.9
|
33.4
|
1.0
|
|
H
|
A:GLY233
|
3.9
|
32.3
|
1.0
|
|
CA
|
A:CA4210
|
3.9
|
30.2
|
1.0
|
|
CB
|
A:ASP247
|
3.9
|
23.1
|
1.0
|
|
H
|
A:ASP243
|
3.9
|
41.2
|
1.0
|
|
CA
|
A:ALA245
|
4.0
|
25.7
|
1.0
|
|
N
|
A:ASP247
|
4.1
|
21.1
|
1.0
|
|
OD2
|
A:ASP243
|
4.1
|
30.8
|
1.0
|
|
HB2
|
A:ASP232
|
4.2
|
37.9
|
1.0
|
|
CB
|
A:ASP232
|
4.2
|
31.6
|
1.0
|
|
C
|
A:SER244
|
4.2
|
29.6
|
1.0
|
|
O
|
A:HOH4340
|
4.2
|
26.8
|
1.0
|
|
OD1
|
A:ASP247
|
4.3
|
25.7
|
1.0
|
|
O
|
A:HOH4457
|
4.3
|
26.3
|
1.0
|
|
CB
|
A:ALA245
|
4.3
|
28.3
|
1.0
|
|
OD2
|
A:ASP232
|
4.3
|
29.5
|
1.0
|
|
CB
|
A:ASP241
|
4.3
|
31.8
|
1.0
|
|
CA
|
A:ASP232
|
4.4
|
30.1
|
1.0
|
|
O
|
A:HOH4389
|
4.4
|
26.9
|
1.0
|
|
HA
|
A:SER244
|
4.4
|
38.3
|
1.0
|
|
N
|
A:LYS246
|
4.5
|
25.2
|
1.0
|
|
HA
|
A:LYS246
|
4.5
|
29.6
|
1.0
|
|
N
|
A:SER244
|
4.5
|
32.3
|
1.0
|
|
O
|
A:HOH4390
|
4.5
|
24.5
|
1.0
|
|
CB
|
A:ASP243
|
4.5
|
33.3
|
1.0
|
|
CA
|
A:ASP243
|
4.6
|
34.1
|
1.0
|
|
N
|
A:ASP243
|
4.6
|
34.3
|
1.0
|
|
N
|
A:GLY233
|
4.6
|
26.9
|
1.0
|
|
CA
|
A:SER244
|
4.6
|
31.9
|
1.0
|
|
CA
|
A:ASP247
|
4.6
|
22.3
|
1.0
|
|
HB3
|
A:ASP241
|
4.7
|
38.1
|
1.0
|
|
HB2
|
A:ASP247
|
4.7
|
27.7
|
1.0
|
|
HB2
|
A:ASP241
|
4.7
|
38.1
|
1.0
|
|
O
|
A:SER244
|
4.8
|
31.8
|
1.0
|
|
HB2
|
A:ASP243
|
4.8
|
40.0
|
1.0
|
|
HB1
|
A:ALA245
|
4.8
|
33.9
|
1.0
|
|
CA
|
A:LYS246
|
4.9
|
24.6
|
1.0
|
|
C
|
A:LYS246
|
4.9
|
20.8
|
1.0
|
|
O
|
A:ALA217
|
4.9
|
26.2
|
1.0
|
|
HA
|
A:ALA245
|
4.9
|
30.8
|
1.0
|
|
Calcium binding site 9 out
of 17 in 6x5v
Go back to
Calcium Binding Sites List in 6x5v
Calcium binding site 9 out
of 17 in the Peptide-Bound Structure of Marinomonas Primoryensis Peptide-Binding Domain
 Mono view
 Stereo pair view
|
|
A full contact list of Calcium with other atoms in the Ca binding
site number 9 of Peptide-Bound Structure of Marinomonas Primoryensis Peptide-Binding Domain within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Ca4212
b:33.2
occ:1.00
|
O
|
A:ILE215
|
2.3
|
33.1
|
1.0
|
|
OD2
|
A:ASP266
|
2.3
|
36.1
|
1.0
|
|
OD2
|
A:ASP243
|
2.3
|
30.8
|
1.0
|
|
OD1
|
A:ASN242
|
2.4
|
38.6
|
1.0
|
|
OD2
|
A:ASP268
|
2.4
|
34.6
|
1.0
|
|
O
|
A:HOH4598
|
2.5
|
30.6
|
1.0
|
|
CG
|
A:ASP266
|
3.3
|
33.1
|
1.0
|
|
HD21
|
A:ASN242
|
3.4
|
58.9
|
1.0
|
|
HB3
|
A:ASP243
|
3.4
|
40.0
|
1.0
|
|
CG
|
A:ASN242
|
3.4
|
41.7
|
1.0
|
|
CG
|
A:ASP243
|
3.5
|
30.7
|
1.0
|
|
CG
|
A:ASP268
|
3.5
|
34.0
|
1.0
|
|
HB3
|
A:GLU214
|
3.5
|
43.3
|
1.0
|
|
C
|
A:ILE215
|
3.5
|
30.7
|
1.0
|
|
ND2
|
A:ASN242
|
3.8
|
49.1
|
1.0
|
|
H
|
A:ILE215
|
3.8
|
37.6
|
1.0
|
|
HA
|
A:ALA216
|
3.8
|
34.8
|
1.0
|
|
O
|
A:HOH4457
|
3.9
|
26.3
|
1.0
|
|
OD1
|
A:ASP266
|
3.9
|
35.0
|
1.0
|
|
CB
|
A:ASP243
|
4.0
|
33.3
|
1.0
|
|
OD1
|
A:ASP268
|
4.0
|
34.2
|
1.0
|
|
O
|
A:HOH4632
|
4.1
|
36.9
|
1.0
|
|
N
|
A:ILE215
|
4.1
|
31.4
|
1.0
|
|
H
|
A:ASN242
|
4.2
|
44.4
|
1.0
|
|
HB3
|
A:ASP266
|
4.3
|
32.4
|
1.0
|
|
CB
|
A:ASP266
|
4.4
|
27.0
|
1.0
|
|
HB
|
A:ILE215
|
4.4
|
37.0
|
1.0
|
|
CA
|
A:ILE215
|
4.4
|
30.3
|
1.0
|
|
CB
|
A:GLU214
|
4.4
|
36.1
|
1.0
|
|
N
|
A:ALA216
|
4.5
|
28.6
|
1.0
|
|
HB2
|
A:ASP268
|
4.5
|
39.3
|
1.0
|
|
CA
|
A:ALA216
|
4.6
|
29.0
|
1.0
|
|
HB2
|
A:ASP266
|
4.6
|
32.4
|
1.0
|
|
OD1
|
A:ASP243
|
4.6
|
28.2
|
1.0
|
|
OE1
|
A:GLU214
|
4.6
|
69.4
|
1.0
|
|
N
|
A:ASP243
|
4.6
|
34.3
|
1.0
|
|
CB
|
A:ASP268
|
4.6
|
32.7
|
1.0
|
|
HB2
|
A:ASP243
|
4.6
|
40.0
|
1.0
|
|
HD22
|
A:ASN242
|
4.6
|
58.9
|
1.0
|
|
H
|
A:ASP243
|
4.7
|
41.2
|
1.0
|
|
HB2
|
A:GLU214
|
4.7
|
43.3
|
1.0
|
|
O
|
A:HOH4763
|
4.7
|
56.1
|
1.0
|
|
HB2
|
A:ASP241
|
4.7
|
38.1
|
1.0
|
|
C
|
A:ASN242
|
4.7
|
38.7
|
1.0
|
|
CB
|
A:ASN242
|
4.7
|
37.6
|
1.0
|
|
HB2
|
A:ALA216
|
4.7
|
36.8
|
1.0
|
|
N
|
A:ASN242
|
4.8
|
37.0
|
1.0
|
|
C
|
A:GLU214
|
4.9
|
33.7
|
1.0
|
|
CB
|
A:ILE215
|
4.9
|
30.9
|
1.0
|
|
HG22
|
A:ILE215
|
4.9
|
37.7
|
1.0
|
|
CA
|
A:ASP243
|
4.9
|
34.1
|
1.0
|
|
Calcium binding site 10 out
of 17 in 6x5v
Go back to
Calcium Binding Sites List in 6x5v
Calcium binding site 10 out
of 17 in the Peptide-Bound Structure of Marinomonas Primoryensis Peptide-Binding Domain
 Mono view
 Stereo pair view
|
|
A full contact list of Calcium with other atoms in the Ca binding
site number 10 of Peptide-Bound Structure of Marinomonas Primoryensis Peptide-Binding Domain within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Ca4213
b:27.2
occ:1.00
|
O
|
A:GLU409
|
2.3
|
26.1
|
1.0
|
|
O
|
A:HOH4690
|
2.4
|
30.5
|
1.0
|
|
OD2
|
A:ASP201
|
2.4
|
27.2
|
1.0
|
|
O
|
A:HOH4511
|
2.4
|
37.2
|
1.0
|
|
O
|
A:HOH4666
|
2.4
|
37.0
|
1.0
|
|
OG1
|
A:THR408
|
2.4
|
30.4
|
1.0
|
|
OD1
|
A:ASP201
|
2.6
|
29.1
|
1.0
|
|
CG
|
A:ASP201
|
2.8
|
28.1
|
1.0
|
|
H
|
A:GLU409
|
3.3
|
31.1
|
1.0
|
|
HG23
|
A:THR408
|
3.4
|
44.1
|
1.0
|
|
C
|
A:GLU409
|
3.5
|
25.7
|
1.0
|
|
N
|
A:GLU409
|
3.6
|
25.9
|
1.0
|
|
CB
|
A:THR408
|
3.7
|
31.6
|
1.0
|
|
HH
|
A:TYR465
|
3.8
|
31.2
|
1.0
|
|
CG2
|
A:THR408
|
4.0
|
36.7
|
1.0
|
|
HG21
|
A:THR408
|
4.2
|
44.1
|
1.0
|
|
CA
|
A:GLU409
|
4.2
|
28.1
|
1.0
|
|
C
|
A:THR408
|
4.2
|
25.6
|
1.0
|
|
O
|
A:HOH4796
|
4.3
|
41.4
|
1.0
|
|
CB
|
A:ASP201
|
4.3
|
25.6
|
1.0
|
|
HB
|
A:THR408
|
4.3
|
38.0
|
1.0
|
|
HA3
|
A:GLY410
|
4.4
|
29.4
|
1.0
|
|
CA
|
A:THR408
|
4.4
|
27.3
|
1.0
|
|
HA
|
A:THR408
|
4.4
|
32.8
|
1.0
|
|
OH
|
A:TYR465
|
4.4
|
26.0
|
1.0
|
|
H
|
A:SER202
|
4.4
|
33.6
|
1.0
|
|
O
|
A:HOH4697
|
4.5
|
43.1
|
1.0
|
|
O
|
A:HOH4371
|
4.5
|
51.8
|
1.0
|
|
N
|
A:GLY410
|
4.5
|
24.3
|
1.0
|
|
O
|
A:HOH4759
|
4.5
|
38.9
|
1.0
|
|
O
|
A:HOH4427
|
4.5
|
34.3
|
1.0
|
|
HE1
|
A:TYR465
|
4.6
|
28.1
|
1.0
|
|
HA2
|
A:GLY410
|
4.6
|
29.4
|
1.0
|
|
HB2
|
A:ASP201
|
4.6
|
30.7
|
1.0
|
|
CA
|
A:GLY410
|
4.7
|
24.5
|
1.0
|
|
O
|
A:HOH4678
|
4.8
|
49.2
|
1.0
|
|
HB3
|
A:ASP201
|
4.8
|
30.7
|
1.0
|
|
HA
|
A:ASP201
|
4.8
|
30.8
|
1.0
|
|
HG22
|
A:THR408
|
4.8
|
44.1
|
1.0
|
|
HA
|
A:GLU409
|
4.9
|
33.7
|
1.0
|
|
O
|
A:SER202
|
4.9
|
31.9
|
1.0
|
|
O
|
A:HOH4689
|
4.9
|
51.6
|
1.0
|
|
HB2
|
A:GLU409
|
4.9
|
49.0
|
1.0
|
|
Reference:
P.L.Davies,
S.Guo.
Molecular Basis For A Bacterial Adhesins Peptide-Binding Module To Be Published.
Page generated: Wed Jul 9 19:45:47 2025
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