Calcium in PDB 6yja: Darb Fom B. Subtilis in Complex with C-Di-Amp

The structure of Darb Fom B. Subtilis in Complex with C-Di-Amp, PDB code: 6yja was solved by J.L.Heidemann, P.Neumann, R.Ficner, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	40.91 / 1.70
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	42.15, 65.41, 104.85, 90, 90, 90
R / Rfree (%)	18.3 / 21.1

The structure of Darb Fom B. Subtilis in Complex with C-Di-Amp also contains other interesting chemical elements:

Chlorine

(Cl)

1 atom

The binding sites of Calcium atom in the Darb Fom B. Subtilis in Complex with C-Di-Amp (pdb code 6yja). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Darb Fom B. Subtilis in Complex with C-Di-Amp, PDB code: 6yja:

Calcium binding site 1 out of 1 in the Darb Fom B. Subtilis in Complex with C-Di-Amp


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Darb Fom B. Subtilis in Complex with C-Di-Amp within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca203 b:31.9 occ:1.00 O A:HOH324 2.2 42.8 1.0 OD1 A:ASP93 2.3 35.7 1.0 O A:HOH363 2.5 34.1 1.0 OD2 A:ASP93 2.9 35.5 1.0 CG A:ASP93 2.9 29.8 1.0 CB A:ASP93 4.3 29.8 1.0 O A:ASP93 4.4 27.3 1.0 C A:ASP93 4.5 29.6 1.0 CA A:ASP93 4.9 29.4 1.0 O A:HOH307 4.9 47.1 1.0

J.L.Heidemann, P.Neumann, R.Ficner. Darb From B. Subtilis To Be Published.