Calcium in PDB 6ynu: Cam-P458 Complex (Crystal Form 1)
Protein crystallography data
The structure of Cam-P458 Complex (Crystal Form 1), PDB code: 6ynu
was solved by
A.E.Mechaly,
A.Voegele,
A.Haouz,
A.Chenal,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
|
Resolution Low / High (Å)
|
67.60 /
3.12
|
|
Space group
|
C 2 2 21
|
|
Cell size a, b, c (Å), α, β, γ (°)
|
73.341,
174.344,
97.843,
90,
90,
90
|
|
R / Rfree (%)
|
24.6 /
29.1
|
Calcium Binding Sites:
The binding sites of Calcium atom in the Cam-P458 Complex (Crystal Form 1)
(pdb code 6ynu). This binding sites where shown within
5.0 Angstroms radius around Calcium atom.
In total 9 binding sites of Calcium where determined in the
Cam-P458 Complex (Crystal Form 1), PDB code: 6ynu:
Jump to Calcium binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
9;
Calcium binding site 1 out
of 9 in 6ynu
Go back to
Calcium Binding Sites List in 6ynu
Calcium binding site 1 out
of 9 in the Cam-P458 Complex (Crystal Form 1)
 Mono view
 Stereo pair view
|
|
A full contact list of Calcium with other atoms in the Ca binding
site number 1 of Cam-P458 Complex (Crystal Form 1) within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Ca201
b:97.6
occ:1.00
|
OD1
|
A:ASP58
|
2.1
|
172.0
|
1.0
|
|
OD1
|
A:ASN60
|
2.2
|
136.4
|
1.0
|
|
OD1
|
A:ASP56
|
2.4
|
137.0
|
1.0
|
|
OE1
|
A:GLU67
|
2.4
|
114.5
|
1.0
|
|
OD2
|
A:ASP58
|
2.5
|
142.3
|
1.0
|
|
O
|
A:THR62
|
2.5
|
114.6
|
1.0
|
|
CG
|
A:ASP58
|
2.6
|
138.9
|
1.0
|
|
OE2
|
A:GLU67
|
2.7
|
111.5
|
1.0
|
|
CG
|
A:ASN60
|
2.8
|
133.6
|
1.0
|
|
ND2
|
A:ASN60
|
2.9
|
150.7
|
1.0
|
|
CD
|
A:GLU67
|
2.9
|
106.7
|
1.0
|
|
C
|
A:THR62
|
3.5
|
114.1
|
1.0
|
|
CG
|
A:ASP56
|
3.6
|
139.2
|
1.0
|
|
OD2
|
A:ASP64
|
3.7
|
112.1
|
1.0
|
|
CB
|
A:ASP58
|
4.0
|
129.9
|
1.0
|
|
CB
|
A:ASN60
|
4.1
|
120.6
|
1.0
|
|
N
|
A:THR62
|
4.2
|
152.1
|
1.0
|
|
OG1
|
A:THR62
|
4.2
|
123.1
|
1.0
|
|
OD2
|
A:ASP56
|
4.3
|
152.1
|
1.0
|
|
N
|
A:ASP64
|
4.3
|
107.2
|
1.0
|
|
N
|
A:ASN60
|
4.3
|
135.4
|
1.0
|
|
CG
|
A:GLU67
|
4.4
|
105.6
|
1.0
|
|
N
|
A:ILE63
|
4.4
|
113.1
|
1.0
|
|
N
|
A:ASP58
|
4.4
|
108.5
|
1.0
|
|
CG
|
A:ASP64
|
4.4
|
109.9
|
1.0
|
|
CA
|
A:THR62
|
4.4
|
130.6
|
1.0
|
|
CA
|
A:ILE63
|
4.4
|
116.9
|
1.0
|
|
CA
|
A:ASN60
|
4.6
|
130.8
|
1.0
|
|
CA
|
A:ASP56
|
4.6
|
106.3
|
1.0
|
|
CA
|
A:ASP58
|
4.7
|
121.7
|
1.0
|
|
CB
|
A:ASP56
|
4.7
|
109.3
|
1.0
|
|
N
|
A:GLY59
|
4.7
|
141.9
|
1.0
|
|
C
|
A:ILE63
|
4.8
|
112.1
|
1.0
|
|
C
|
A:ASN60
|
4.8
|
134.3
|
1.0
|
|
CB
|
A:THR62
|
4.9
|
120.6
|
1.0
|
|
CB
|
A:ASP64
|
5.0
|
109.6
|
1.0
|
|
C
|
A:ASP56
|
5.0
|
122.7
|
1.0
|
|
Calcium binding site 2 out
of 9 in 6ynu
Go back to
Calcium Binding Sites List in 6ynu
Calcium binding site 2 out
of 9 in the Cam-P458 Complex (Crystal Form 1)
 Mono view
 Stereo pair view
|
|
A full contact list of Calcium with other atoms in the Ca binding
site number 2 of Cam-P458 Complex (Crystal Form 1) within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Ca202
b:130.8
occ:1.00
|
OE1
|
A:GLU140
|
2.2
|
150.1
|
1.0
|
|
OD1
|
A:ASP131
|
2.2
|
164.0
|
1.0
|
|
OD1
|
A:ASP133
|
2.3
|
143.4
|
1.0
|
|
O
|
A:GLN135
|
2.5
|
119.7
|
1.0
|
|
OE2
|
A:GLU140
|
2.5
|
137.8
|
1.0
|
|
OD1
|
A:ASP129
|
2.5
|
121.1
|
1.0
|
|
OD2
|
A:ASP131
|
2.5
|
161.4
|
1.0
|
|
CD
|
A:GLU140
|
2.7
|
127.4
|
1.0
|
|
CG
|
A:ASP131
|
2.7
|
162.8
|
1.0
|
|
CG
|
A:ASP133
|
3.1
|
140.2
|
1.0
|
|
OD2
|
A:ASP133
|
3.3
|
144.7
|
1.0
|
|
C
|
A:GLN135
|
3.5
|
119.3
|
1.0
|
|
CG
|
A:ASP129
|
3.7
|
141.1
|
1.0
|
|
N
|
A:ASN137
|
3.8
|
104.2
|
1.0
|
|
CA
|
A:VAL136
|
4.1
|
111.5
|
1.0
|
|
CG
|
A:ASN137
|
4.1
|
106.4
|
1.0
|
|
CG
|
A:GLU140
|
4.1
|
111.5
|
1.0
|
|
CB
|
A:ASP131
|
4.2
|
145.9
|
1.0
|
|
ND2
|
A:ASN137
|
4.2
|
109.1
|
1.0
|
|
N
|
A:VAL136
|
4.2
|
122.8
|
1.0
|
|
OD2
|
A:ASP129
|
4.3
|
121.8
|
1.0
|
|
CB
|
A:ASN137
|
4.4
|
105.0
|
1.0
|
|
C
|
A:VAL136
|
4.4
|
100.3
|
1.0
|
|
OD1
|
A:ASN137
|
4.4
|
105.5
|
1.0
|
|
CB
|
A:ASP133
|
4.5
|
132.4
|
1.0
|
|
N
|
A:ASP131
|
4.6
|
144.8
|
1.0
|
|
N
|
A:ASP133
|
4.6
|
156.1
|
1.0
|
|
CA
|
A:GLN135
|
4.6
|
108.6
|
1.0
|
|
N
|
A:GLN135
|
4.7
|
133.7
|
1.0
|
|
CA
|
A:ASN137
|
4.8
|
102.2
|
1.0
|
|
CD1
|
A:TYR99
|
4.8
|
143.2
|
1.0
|
|
CA
|
A:ASP129
|
4.8
|
112.8
|
1.0
|
|
CB
|
A:ASP129
|
4.8
|
131.2
|
1.0
|
|
CE1
|
A:TYR99
|
4.8
|
156.3
|
1.0
|
|
N
|
A:GLY132
|
4.9
|
147.6
|
1.0
|
|
CA
|
A:ASP131
|
4.9
|
155.8
|
1.0
|
|
N
|
A:ILE130
|
4.9
|
138.8
|
1.0
|
|
CB
|
A:GLN135
|
4.9
|
127.7
|
1.0
|
|
CB
|
A:GLU140
|
5.0
|
111.7
|
1.0
|
|
Calcium binding site 3 out
of 9 in 6ynu
Go back to
Calcium Binding Sites List in 6ynu
Calcium binding site 3 out
of 9 in the Cam-P458 Complex (Crystal Form 1)
 Mono view
 Stereo pair view
|
|
A full contact list of Calcium with other atoms in the Ca binding
site number 3 of Cam-P458 Complex (Crystal Form 1) within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Ca203
b:139.9
occ:1.00
|
O
|
A:TYR99
|
2.1
|
146.2
|
1.0
|
|
OE1
|
A:GLU104
|
2.2
|
133.3
|
1.0
|
|
OD1
|
A:ASP95
|
2.2
|
134.3
|
1.0
|
|
OD1
|
A:ASN97
|
2.3
|
114.4
|
1.0
|
|
OD1
|
A:ASP93
|
2.4
|
105.2
|
1.0
|
|
OE2
|
A:GLU104
|
2.6
|
125.3
|
1.0
|
|
CD
|
A:GLU104
|
2.7
|
125.9
|
1.0
|
|
CG
|
A:ASP95
|
2.9
|
125.9
|
1.0
|
|
OD2
|
A:ASP95
|
2.9
|
144.5
|
1.0
|
|
CG
|
A:ASN97
|
3.1
|
117.1
|
1.0
|
|
C
|
A:TYR99
|
3.3
|
103.7
|
1.0
|
|
ND2
|
A:ASN97
|
3.4
|
141.4
|
1.0
|
|
CG
|
A:ASP93
|
3.7
|
103.8
|
1.0
|
|
CG
|
A:GLU104
|
4.1
|
112.1
|
1.0
|
|
N
|
A:SER101
|
4.1
|
111.8
|
1.0
|
|
N
|
A:ILE100
|
4.2
|
100.4
|
1.0
|
|
CA
|
A:ILE100
|
4.2
|
98.5
|
1.0
|
|
CB
|
A:ASP95
|
4.3
|
118.4
|
1.0
|
|
N
|
A:TYR99
|
4.3
|
139.2
|
1.0
|
|
CA
|
A:TYR99
|
4.3
|
118.3
|
1.0
|
|
N
|
A:ASP95
|
4.3
|
111.5
|
1.0
|
|
CB
|
A:ASN97
|
4.4
|
119.0
|
1.0
|
|
CA
|
A:ASP93
|
4.5
|
96.9
|
1.0
|
|
OD2
|
A:ASP93
|
4.5
|
107.1
|
1.0
|
|
C
|
A:ILE100
|
4.6
|
106.8
|
1.0
|
|
CB
|
A:ASP93
|
4.6
|
98.5
|
1.0
|
|
CB
|
A:TYR99
|
4.6
|
113.2
|
1.0
|
|
C
|
A:ASP93
|
4.6
|
107.9
|
1.0
|
|
OG
|
A:SER101
|
4.7
|
118.0
|
1.0
|
|
N
|
A:ASN97
|
4.7
|
127.2
|
1.0
|
|
CB
|
A:SER101
|
4.7
|
109.8
|
1.0
|
|
CA
|
A:ASP95
|
4.8
|
115.8
|
1.0
|
|
N
|
A:LYS94
|
4.8
|
116.9
|
1.0
|
|
CB
|
A:GLU104
|
4.9
|
101.0
|
1.0
|
|
Calcium binding site 4 out
of 9 in 6ynu
Go back to
Calcium Binding Sites List in 6ynu
Calcium binding site 4 out
of 9 in the Cam-P458 Complex (Crystal Form 1)
 Mono view
 Stereo pair view
|
|
A full contact list of Calcium with other atoms in the Ca binding
site number 4 of Cam-P458 Complex (Crystal Form 1) within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Ca204
b:133.5
occ:1.00
|
O
|
A:THR26
|
2.3
|
131.3
|
1.0
|
|
OE1
|
A:GLU31
|
2.3
|
134.4
|
1.0
|
|
OD1
|
A:ASP24
|
2.4
|
133.6
|
1.0
|
|
OD1
|
A:ASP22
|
2.4
|
174.7
|
1.0
|
|
OD1
|
A:ASP20
|
2.4
|
126.5
|
1.0
|
|
OE2
|
A:GLU31
|
2.5
|
137.1
|
1.0
|
|
CD
|
A:GLU31
|
2.7
|
136.4
|
1.0
|
|
OD2
|
A:ASP22
|
2.9
|
140.2
|
1.0
|
|
CG
|
A:ASP22
|
3.0
|
139.7
|
1.0
|
|
CG
|
A:ASP24
|
3.2
|
134.3
|
1.0
|
|
OD2
|
A:ASP24
|
3.3
|
146.4
|
1.0
|
|
C
|
A:THR26
|
3.5
|
133.1
|
1.0
|
|
CG
|
A:ASP20
|
3.6
|
124.4
|
1.0
|
|
CA
|
A:ASP20
|
4.1
|
131.4
|
1.0
|
|
CG2
|
A:THR28
|
4.2
|
156.9
|
1.0
|
|
CG
|
A:GLU31
|
4.2
|
148.1
|
1.0
|
|
CB
|
A:ASP20
|
4.3
|
129.4
|
1.0
|
|
OG1
|
A:THR26
|
4.3
|
128.9
|
1.0
|
|
CA
|
A:ILE27
|
4.4
|
124.8
|
1.0
|
|
N
|
A:THR28
|
4.4
|
129.5
|
1.0
|
|
N
|
A:ILE27
|
4.4
|
124.0
|
1.0
|
|
CB
|
A:ASP22
|
4.4
|
136.9
|
1.0
|
|
N
|
A:THR26
|
4.4
|
134.0
|
1.0
|
|
CB
|
A:ASP24
|
4.5
|
134.5
|
1.0
|
|
CA
|
A:THR26
|
4.5
|
135.7
|
1.0
|
|
C
|
A:ASP20
|
4.6
|
127.3
|
1.0
|
|
N
|
A:ASP24
|
4.6
|
131.3
|
1.0
|
|
OD2
|
A:ASP20
|
4.6
|
123.3
|
1.0
|
|
N
|
A:ASP22
|
4.7
|
147.7
|
1.0
|
|
C
|
A:ILE27
|
4.9
|
126.1
|
1.0
|
|
N
|
A:GLY23
|
4.9
|
130.3
|
1.0
|
|
N
|
A:LYS21
|
4.9
|
128.0
|
1.0
|
|
Calcium binding site 5 out
of 9 in 6ynu
Go back to
Calcium Binding Sites List in 6ynu
Calcium binding site 5 out
of 9 in the Cam-P458 Complex (Crystal Form 1)
 Mono view
 Stereo pair view
|
|
A full contact list of Calcium with other atoms in the Ca binding
site number 5 of Cam-P458 Complex (Crystal Form 1) within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Ca205
b:137.4
occ:1.00
|
OE2
|
A:GLU54
|
2.3
|
168.2
|
1.0
|
|
CD
|
A:GLU54
|
3.3
|
153.1
|
1.0
|
|
CG
|
A:GLU54
|
3.7
|
141.7
|
1.0
|
|
OD2
|
A:ASP50
|
3.9
|
178.4
|
1.0
|
|
OD1
|
A:ASP50
|
3.9
|
170.5
|
1.0
|
|
CG
|
A:ASP50
|
4.3
|
172.8
|
1.0
|
|
OE1
|
A:GLU54
|
4.5
|
119.8
|
1.0
|
|
Calcium binding site 6 out
of 9 in 6ynu
Go back to
Calcium Binding Sites List in 6ynu
Calcium binding site 6 out
of 9 in the Cam-P458 Complex (Crystal Form 1)
 Mono view
 Stereo pair view
|
|
A full contact list of Calcium with other atoms in the Ca binding
site number 6 of Cam-P458 Complex (Crystal Form 1) within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Ca201
b:132.3
occ:1.00
|
O
|
C:TYR99
|
2.0
|
194.8
|
1.0
|
|
OE1
|
C:GLU104
|
2.4
|
149.0
|
1.0
|
|
OD1
|
C:ASN97
|
2.4
|
149.2
|
1.0
|
|
OD1
|
C:ASP95
|
2.5
|
129.6
|
1.0
|
|
OD1
|
C:ASP93
|
2.5
|
151.7
|
1.0
|
|
OE2
|
C:GLU104
|
2.6
|
150.0
|
1.0
|
|
CD
|
C:GLU104
|
2.8
|
153.1
|
1.0
|
|
OD2
|
C:ASP95
|
2.8
|
156.9
|
1.0
|
|
CG
|
C:ASP95
|
3.0
|
150.6
|
1.0
|
|
C
|
C:TYR99
|
3.2
|
159.8
|
1.0
|
|
CG
|
C:ASN97
|
3.3
|
147.5
|
1.0
|
|
ND2
|
C:ASN97
|
3.7
|
152.9
|
1.0
|
|
CG
|
C:ASP93
|
3.7
|
145.9
|
1.0
|
|
N
|
C:ILE100
|
4.1
|
150.0
|
1.0
|
|
CA
|
C:ILE100
|
4.1
|
151.8
|
1.0
|
|
N
|
C:SER101
|
4.1
|
160.3
|
1.0
|
|
CA
|
C:TYR99
|
4.2
|
157.3
|
1.0
|
|
N
|
C:TYR99
|
4.2
|
146.9
|
1.0
|
|
CG
|
C:GLU104
|
4.2
|
164.2
|
1.0
|
|
CB
|
C:ASP95
|
4.4
|
144.9
|
1.0
|
|
N
|
C:ASP95
|
4.5
|
142.4
|
1.0
|
|
CA
|
C:ASP93
|
4.5
|
131.9
|
1.0
|
|
C
|
C:ILE100
|
4.6
|
158.5
|
1.0
|
|
OD2
|
C:ASP93
|
4.6
|
130.0
|
1.0
|
|
CB
|
C:ASN97
|
4.6
|
152.7
|
1.0
|
|
CB
|
C:TYR99
|
4.6
|
163.4
|
1.0
|
|
CB
|
C:ASP93
|
4.6
|
145.6
|
1.0
|
|
OG
|
C:SER101
|
4.7
|
154.8
|
1.0
|
|
C
|
C:ASP93
|
4.7
|
127.6
|
1.0
|
|
NE2
|
C:GLN135
|
4.8
|
159.8
|
1.0
|
|
N
|
C:ASN97
|
4.8
|
140.4
|
1.0
|
|
N
|
C:LYS94
|
4.8
|
135.3
|
1.0
|
|
CB
|
C:SER101
|
4.9
|
163.6
|
1.0
|
|
CA
|
C:ASP95
|
5.0
|
145.8
|
1.0
|
|
Calcium binding site 7 out
of 9 in 6ynu
Go back to
Calcium Binding Sites List in 6ynu
Calcium binding site 7 out
of 9 in the Cam-P458 Complex (Crystal Form 1)
 Mono view
 Stereo pair view
|
|
A full contact list of Calcium with other atoms in the Ca binding
site number 7 of Cam-P458 Complex (Crystal Form 1) within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Ca202
b:145.8
occ:1.00
|
OD1
|
C:ASP58
|
2.1
|
205.8
|
1.0
|
|
OD1
|
C:ASN60
|
2.2
|
173.3
|
1.0
|
|
O
|
C:THR62
|
2.3
|
150.7
|
1.0
|
|
OD1
|
C:ASP56
|
2.3
|
200.6
|
1.0
|
|
OE1
|
C:GLU67
|
2.5
|
154.2
|
1.0
|
|
CG
|
C:ASP58
|
2.9
|
178.6
|
1.0
|
|
OD2
|
C:ASP58
|
3.0
|
203.6
|
1.0
|
|
OE2
|
C:GLU67
|
3.2
|
170.4
|
1.0
|
|
CD
|
C:GLU67
|
3.2
|
154.8
|
1.0
|
|
CG
|
C:ASN60
|
3.4
|
162.1
|
1.0
|
|
C
|
C:THR62
|
3.5
|
154.9
|
1.0
|
|
CG
|
C:ASP56
|
3.6
|
193.9
|
1.0
|
|
N
|
C:ASN60
|
3.9
|
165.6
|
1.0
|
|
O
|
C:ASN60
|
4.1
|
147.6
|
1.0
|
|
OD2
|
C:ASP56
|
4.3
|
193.8
|
1.0
|
|
ND2
|
C:ASN60
|
4.3
|
148.8
|
1.0
|
|
OD2
|
C:ASP64
|
4.3
|
169.6
|
1.0
|
|
CB
|
C:ASP58
|
4.3
|
150.9
|
1.0
|
|
N
|
C:GLY59
|
4.3
|
166.2
|
1.0
|
|
N
|
C:ILE63
|
4.3
|
155.4
|
1.0
|
|
CA
|
C:ILE63
|
4.3
|
152.9
|
1.0
|
|
CA
|
C:ASP56
|
4.4
|
158.4
|
1.0
|
|
N
|
C:ASP58
|
4.4
|
167.4
|
1.0
|
|
N
|
C:THR62
|
4.4
|
154.4
|
1.0
|
|
CB
|
C:ASN60
|
4.4
|
144.3
|
1.0
|
|
C
|
C:ASN60
|
4.5
|
168.7
|
1.0
|
|
CA
|
C:ASN60
|
4.5
|
158.5
|
1.0
|
|
CA
|
C:THR62
|
4.6
|
160.5
|
1.0
|
|
N
|
C:ASP64
|
4.6
|
145.2
|
1.0
|
|
CB
|
C:ASP56
|
4.6
|
170.7
|
1.0
|
|
CG
|
C:GLU67
|
4.7
|
154.1
|
1.0
|
|
CA
|
C:ASP58
|
4.7
|
157.4
|
1.0
|
|
C
|
C:ASP56
|
4.8
|
159.1
|
1.0
|
|
C
|
C:ASP58
|
4.8
|
164.3
|
1.0
|
|
C
|
C:GLY59
|
4.9
|
179.3
|
1.0
|
|
C
|
C:ILE63
|
4.9
|
148.2
|
1.0
|
|
OG1
|
C:THR62
|
4.9
|
191.6
|
1.0
|
|
CG
|
C:ASP64
|
4.9
|
166.7
|
1.0
|
|
N
|
C:ALA57
|
5.0
|
158.9
|
1.0
|
|
Calcium binding site 8 out
of 9 in 6ynu
Go back to
Calcium Binding Sites List in 6ynu
Calcium binding site 8 out
of 9 in the Cam-P458 Complex (Crystal Form 1)
 Mono view
 Stereo pair view
|
|
A full contact list of Calcium with other atoms in the Ca binding
site number 8 of Cam-P458 Complex (Crystal Form 1) within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Ca203
b:174.8
occ:1.00
|
OE2
|
C:GLU140
|
2.3
|
182.9
|
1.0
|
|
OD1
|
C:ASP131
|
2.3
|
178.5
|
1.0
|
|
OD1
|
C:ASP133
|
2.4
|
167.9
|
1.0
|
|
O
|
C:GLN135
|
2.4
|
164.5
|
1.0
|
|
OD1
|
C:ASP129
|
2.5
|
184.3
|
1.0
|
|
CD
|
C:GLU140
|
2.9
|
182.9
|
1.0
|
|
CG
|
C:ASP131
|
2.9
|
175.7
|
1.0
|
|
OD2
|
C:ASP131
|
3.0
|
181.4
|
1.0
|
|
OE1
|
C:GLU140
|
3.1
|
187.6
|
1.0
|
|
CG
|
C:ASP133
|
3.3
|
164.6
|
1.0
|
|
C
|
C:GLN135
|
3.5
|
169.5
|
1.0
|
|
OD2
|
C:ASP133
|
3.6
|
164.3
|
1.0
|
|
CG
|
C:ASP129
|
3.7
|
183.9
|
1.0
|
|
N
|
C:ASN137
|
3.8
|
166.5
|
1.0
|
|
CA
|
C:VAL136
|
4.0
|
162.7
|
1.0
|
|
N
|
C:VAL136
|
4.2
|
168.8
|
1.0
|
|
CG
|
C:GLU140
|
4.2
|
175.7
|
1.0
|
|
OD2
|
C:ASP129
|
4.4
|
177.4
|
1.0
|
|
C
|
C:VAL136
|
4.4
|
158.7
|
1.0
|
|
CB
|
C:ASP131
|
4.4
|
172.4
|
1.0
|
|
CG
|
C:ASN137
|
4.4
|
165.9
|
1.0
|
|
N
|
C:ASP131
|
4.5
|
176.5
|
1.0
|
|
CA
|
C:GLN135
|
4.6
|
169.4
|
1.0
|
|
N
|
C:ASP133
|
4.6
|
173.4
|
1.0
|
|
CB
|
C:ASN137
|
4.6
|
169.1
|
1.0
|
|
CB
|
C:ASP133
|
4.6
|
165.8
|
1.0
|
|
N
|
C:GLN135
|
4.6
|
177.7
|
1.0
|
|
OD1
|
C:ASN137
|
4.6
|
156.6
|
1.0
|
|
ND2
|
C:ASN137
|
4.7
|
176.7
|
1.0
|
|
N
|
C:GLY132
|
4.7
|
183.6
|
1.0
|
|
CA
|
C:ASP129
|
4.8
|
177.7
|
1.0
|
|
N
|
C:ILE130
|
4.8
|
186.5
|
1.0
|
|
CB
|
C:ASP129
|
4.8
|
181.4
|
1.0
|
|
CA
|
C:ASN137
|
4.8
|
166.3
|
1.0
|
|
CA
|
C:ASP131
|
4.9
|
179.1
|
1.0
|
|
CB
|
C:GLN135
|
4.9
|
169.3
|
1.0
|
|
CD1
|
C:TYR99
|
5.0
|
168.1
|
1.0
|
|
Calcium binding site 9 out
of 9 in 6ynu
Go back to
Calcium Binding Sites List in 6ynu
Calcium binding site 9 out
of 9 in the Cam-P458 Complex (Crystal Form 1)
 Mono view
 Stereo pair view
|
|
A full contact list of Calcium with other atoms in the Ca binding
site number 9 of Cam-P458 Complex (Crystal Form 1) within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Ca204
b:157.4
occ:1.00
|
O
|
C:THR26
|
2.2
|
157.6
|
1.0
|
|
OE1
|
C:GLU31
|
2.4
|
171.7
|
1.0
|
|
OD1
|
C:ASP24
|
2.4
|
168.0
|
1.0
|
|
OD1
|
C:ASP22
|
2.4
|
171.0
|
1.0
|
|
OD1
|
C:ASP20
|
2.5
|
152.6
|
1.0
|
|
OE2
|
C:GLU31
|
3.0
|
173.9
|
1.0
|
|
CD
|
C:GLU31
|
3.0
|
174.5
|
1.0
|
|
CG
|
C:ASP24
|
3.1
|
171.5
|
1.0
|
|
CG
|
C:ASP22
|
3.2
|
175.8
|
1.0
|
|
OD2
|
C:ASP22
|
3.2
|
162.8
|
1.0
|
|
OD2
|
C:ASP24
|
3.3
|
174.8
|
1.0
|
|
C
|
C:THR26
|
3.5
|
154.8
|
1.0
|
|
CG
|
C:ASP20
|
3.7
|
154.9
|
1.0
|
|
CG2
|
C:THR28
|
3.8
|
167.8
|
1.0
|
|
OG1
|
C:THR26
|
4.1
|
164.4
|
1.0
|
|
CA
|
C:ASP20
|
4.3
|
158.0
|
1.0
|
|
N
|
C:THR28
|
4.3
|
166.2
|
1.0
|
|
N
|
C:THR26
|
4.3
|
164.5
|
1.0
|
|
CB
|
C:ASP20
|
4.4
|
154.1
|
1.0
|
|
N
|
C:ILE27
|
4.4
|
159.0
|
1.0
|
|
CA
|
C:THR26
|
4.4
|
161.2
|
1.0
|
|
CA
|
C:ILE27
|
4.5
|
170.2
|
1.0
|
|
CG
|
C:GLU31
|
4.5
|
181.4
|
1.0
|
|
CB
|
C:ASP24
|
4.5
|
162.4
|
1.0
|
|
CB
|
C:ASP22
|
4.6
|
176.6
|
1.0
|
|
N
|
C:ASP24
|
4.7
|
181.1
|
1.0
|
|
OD2
|
C:ASP20
|
4.7
|
147.4
|
1.0
|
|
C
|
C:ASP20
|
4.7
|
163.5
|
1.0
|
|
N
|
C:ASP22
|
4.8
|
176.6
|
1.0
|
|
C
|
C:ILE27
|
4.9
|
165.3
|
1.0
|
|
CB
|
C:THR26
|
4.9
|
159.9
|
1.0
|
|
N
|
C:GLY23
|
5.0
|
153.6
|
1.0
|
|
Reference:
A.Voegele,
M.Sadi,
D.P.O'brien,
P.Gehan,
D.Raoux‐Barbot,
M.Davi,
S.Hoos,
S.Brule,
B.Raynal,
P.Weber,
A.E.Mechaly,
A.Haouz,
N.Rodriguez,
P.Vachette,
D.Durand,
S.Brier,
D.Ladant,
A.Chenal.
A High-Affinity Calmodulin-Binding Site in the Cyaa Toxin Translocation Domain Is Essential For Invasion of Eukaryotic Cells Adv Sci 2021.
ISSN: ESSN 2198-3844
DOI: 10.1002/ADVS.202003630
Page generated: Wed Jul 9 20:25:00 2025
|
