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Calcium in PDB 7atn: Cytochrome C Oxidase Structure in R-State

Enzymatic activity of Cytochrome C Oxidase Structure in R-State

All present enzymatic activity of Cytochrome C Oxidase Structure in R-State:
7.1.1.9;

Other elements in 7atn:

The structure of Cytochrome C Oxidase Structure in R-State also contains other interesting chemical elements:

Iron (Fe) 2 atoms
Manganese (Mn) 1 atom
Copper (Cu) 3 atoms

Calcium Binding Sites:

The binding sites of Calcium atom in the Cytochrome C Oxidase Structure in R-State (pdb code 7atn). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Cytochrome C Oxidase Structure in R-State, PDB code: 7atn:

Calcium binding site 1 out of 1 in 7atn

Go back to Calcium Binding Sites List in 7atn
Calcium binding site 1 out of 1 in the Cytochrome C Oxidase Structure in R-State


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Cytochrome C Oxidase Structure in R-State within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca604

b:5.0
occ:1.00
O A:GLY61 2.2 7.7 1.0
OE1 A:GLU56 2.4 10.7 1.0
O A:HIS59 2.5 7.0 1.0
OE1 A:GLN63 2.5 9.2 1.0
O A:GLU56 2.5 10.7 1.0
O A:HOH705 3.0 7.9 1.0
CD A:GLN63 3.4 9.2 1.0
C A:GLY61 3.5 7.7 1.0
C A:HIS59 3.5 7.0 1.0
C A:GLU56 3.6 10.7 1.0
CD A:GLU56 3.6 10.7 1.0
NE2 A:GLN63 3.7 9.2 1.0
N A:HIS59 4.0 7.0 1.0
O A:PRO60 4.1 8.4 1.0
C A:PRO60 4.2 8.4 1.0
CA A:GLU56 4.2 10.7 1.0
CA A:VAL62 4.2 8.2 1.0
CA A:HIS59 4.2 7.0 1.0
N A:VAL62 4.3 8.2 1.0
N A:GLN63 4.3 9.2 1.0
CG A:GLU56 4.3 10.7 1.0
N A:GLY61 4.4 7.7 1.0
CA A:GLY61 4.5 7.7 1.0
N A:PRO60 4.5 8.4 1.0
OE2 A:GLU56 4.6 10.7 1.0
CB A:HIS59 4.6 7.0 1.0
OD1 A:ASP477 4.6 12.4 1.0
C A:VAL62 4.6 8.2 1.0
CA A:PRO60 4.7 8.4 1.0
N A:LEU57 4.7 6.6 1.0
CG A:GLN63 4.7 9.2 1.0
N A:GLN58 4.8 6.3 1.0
CB A:GLN63 4.8 9.2 1.0
CB A:GLU56 4.9 10.7 1.0
CA A:LEU57 4.9 6.6 1.0
O A:MET55 4.9 7.2 1.0
C A:LEU57 4.9 6.6 1.0

Reference:

F.Kolbe, S.Safarian, H.Michel. Cytochrome C Oxidase Structure in R-State To Be Published.
Page generated: Wed Jul 9 20:51:40 2025

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