Atomistry » Calcium » PDB 7aq2-7b1l » 7az1
Atomistry »
  Calcium »
    PDB 7aq2-7b1l »
      7az1 »

Calcium in PDB 7az1: 14-3-3 Sigma with PIN1 Binding Site PS72 and Covalently Bound LVD1013

Enzymatic activity of 14-3-3 Sigma with PIN1 Binding Site PS72 and Covalently Bound LVD1013

All present enzymatic activity of 14-3-3 Sigma with PIN1 Binding Site PS72 and Covalently Bound LVD1013:
5.2.1.8;

Protein crystallography data

The structure of 14-3-3 Sigma with PIN1 Binding Site PS72 and Covalently Bound LVD1013, PDB code: 7az1 was solved by M.Wolter, L.V.Dijck, C.Ottmann, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 45.44 / 1.15
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 82.254, 111.748, 62.456, 90, 90, 90
R / Rfree (%) 18.3 / 19.2

Other elements in 7az1:

The structure of 14-3-3 Sigma with PIN1 Binding Site PS72 and Covalently Bound LVD1013 also contains other interesting chemical elements:

Chlorine (Cl) 1 atom
Fluorine (F) 3 atoms

Calcium Binding Sites:

The binding sites of Calcium atom in the 14-3-3 Sigma with PIN1 Binding Site PS72 and Covalently Bound LVD1013 (pdb code 7az1). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the 14-3-3 Sigma with PIN1 Binding Site PS72 and Covalently Bound LVD1013, PDB code: 7az1:
Jump to Calcium binding site number: 1; 2;

Calcium binding site 1 out of 2 in 7az1

Go back to Calcium Binding Sites List in 7az1
Calcium binding site 1 out of 2 in the 14-3-3 Sigma with PIN1 Binding Site PS72 and Covalently Bound LVD1013


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of 14-3-3 Sigma with PIN1 Binding Site PS72 and Covalently Bound LVD1013 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca302

b:19.8
occ:1.00
OE1 A:GLU35 2.3 19.9 1.0
O A:GLU110 2.3 18.6 1.0
O A:HOH487 2.3 27.2 1.0
O A:HOH617 2.4 26.4 1.0
CD A:GLU35 2.9 22.3 1.0
OE2 A:GLU35 2.9 29.0 1.0
C A:GLU110 3.5 15.7 1.0
N A:GLY112 4.0 17.6 1.0
O A:HOH639 4.1 46.1 1.0
CG A:GLU35 4.3 17.1 1.0
CA A:GLU110 4.4 14.7 1.0
N A:ALA111 4.4 14.9 1.0
OE1 A:GLU110 4.5 29.9 1.0
O A:HOH623 4.5 32.2 1.0
O A:HOH461 4.5 33.0 1.0
CA A:ALA111 4.5 15.9 1.0
CB A:GLU110 4.6 16.2 1.0
C A:ALA111 4.7 16.2 1.0
O A:HOH567 4.7 33.1 1.0
CA A:GLY112 4.8 18.1 1.0

Calcium binding site 2 out of 2 in 7az1

Go back to Calcium Binding Sites List in 7az1
Calcium binding site 2 out of 2 in the 14-3-3 Sigma with PIN1 Binding Site PS72 and Covalently Bound LVD1013


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of 14-3-3 Sigma with PIN1 Binding Site PS72 and Covalently Bound LVD1013 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca303

b:31.9
occ:0.42
O A:LYS77 2.4 42.2 1.0
O A:HOH649 2.5 39.5 1.0
OE1 A:GLU80 2.5 19.7 1.0
OE2 A:GLU80 2.8 19.9 1.0
CD A:GLU80 2.9 18.4 1.0
O A:HOH466 3.0 28.7 1.0
C A:LYS77 3.5 40.6 1.0
CA A:GLY78 4.0 24.9 1.0
N A:GLY78 4.1 32.0 1.0
CG A:GLU80 4.2 16.4 1.0
CA A:LYS77 4.5 45.6 1.0
C A:GLY78 4.7 20.6 1.0
CB A:GLU80 4.8 15.1 1.0
CD A:PRO79 4.9 21.6 1.0
CB A:LYS77 5.0 47.7 1.0

Reference:

P.J.Cossar, M.Wolter, L.Van Dijck, D.Valenti, L.M.Levy, C.Ottmann, L.Brunsveld. Reversible Covalent Imine-Tethering For Selective Stabilization of 14-3-3 Hub Protein Interactions. J.Am.Chem.Soc. 2021.
ISSN: ESSN 1520-5126
PubMed: 34047554
DOI: 10.1021/JACS.1C03035
Page generated: Wed Jul 9 20:53:46 2025

Last articles

Mg in 4JI1
Mg in 4JI0
Mg in 4JI2
Mg in 4JI3
Mg in 4JHD
Mg in 4JH6
Mg in 4JH8
Mg in 4JH7
Mg in 4JH3
Mg in 4JH5
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy