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Calcium in PDB 7bao: Human TENEURIN4 Mut C1

Calcium Binding Sites:

The binding sites of Calcium atom in the Human TENEURIN4 Mut C1 (pdb code 7bao). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 3 binding sites of Calcium where determined in the Human TENEURIN4 Mut C1, PDB code: 7bao:
Jump to Calcium binding site number: 1; 2; 3;

Calcium binding site 1 out of 3 in 7bao

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Calcium binding site 1 out of 3 in the Human TENEURIN4 Mut C1


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Human TENEURIN4 Mut C1 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca2808

b:181.6
occ:1.00
O A:ALA837 2.2 177.7 1.0
OD1 A:ASP851 2.3 175.8 1.0
OE2 A:GLU835 2.3 176.8 1.0
OD1 A:ASN844 2.3 178.1 1.0
O A:LYS842 2.3 178.4 1.0
OD1 A:ASP840 2.3 178.8 1.0
CD A:GLU835 3.2 176.8 1.0
CG A:ASP840 3.4 178.8 1.0
CG A:ASN844 3.4 178.1 1.0
C A:ALA837 3.4 177.7 1.0
C A:LYS842 3.5 178.4 1.0
CG A:ASP851 3.5 175.8 1.0
CG A:GLU835 3.8 176.8 1.0
N A:LYS842 3.9 178.4 1.0
OD2 A:ASP840 3.9 178.8 1.0
ND2 A:ASN844 4.0 178.1 1.0
N A:ASP851 4.1 175.8 1.0
OE1 A:GLU835 4.1 176.8 1.0
CA A:LYS842 4.2 178.4 1.0
CA A:CYS838 4.3 177.5 1.0
OD2 A:ASP851 4.3 175.8 1.0
N A:CYS838 4.3 177.5 1.0
CA A:ASP851 4.3 175.8 1.0
N A:ASP840 4.3 178.8 1.0
N A:ASN844 4.4 178.1 1.0
CB A:ALA837 4.4 177.7 1.0
CA A:ALA837 4.5 177.7 1.0
N A:SER841 4.5 178.7 1.0
CB A:ASP851 4.5 175.8 1.0
N A:ASP843 4.5 177.3 1.0
CB A:LYS842 4.6 178.4 1.0
CB A:ASP840 4.6 178.8 1.0
C A:CYS838 4.6 177.5 1.0
CB A:ASN844 4.6 178.1 1.0
N A:GLY839 4.7 176.8 1.0
CA A:ASP840 4.8 178.8 1.0
C A:ASP840 4.8 178.8 1.0
CA A:ASP843 4.8 177.3 1.0
CG1 A:VAL850 4.8 174.5 1.0
C A:SER841 4.9 178.7 1.0
N A:ALA837 4.9 177.7 1.0

Calcium binding site 2 out of 3 in 7bao

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Calcium binding site 2 out of 3 in the Human TENEURIN4 Mut C1


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Human TENEURIN4 Mut C1 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca2809

b:176.9
occ:1.00
OD1 A:ASP845 2.3 177.6 1.0
O A:LEU849 2.3 171.6 1.0
OD2 A:ASP854 2.3 171.9 1.0
OE1 A:GLU835 2.3 176.8 1.0
OD1 A:ASP843 2.3 177.3 1.0
OD1 A:ASP847 2.3 174.2 1.0
CG A:ASP847 3.3 174.2 1.0
CG A:ASP845 3.3 177.6 1.0
CG A:ASP854 3.3 171.9 1.0
C A:LEU849 3.4 171.6 1.0
CG A:ASP843 3.5 177.3 1.0
CD A:GLU835 3.5 176.8 1.0
OD2 A:ASP847 3.7 174.2 1.0
CB A:ASP854 3.8 171.9 1.0
OD2 A:ASP845 3.8 177.6 1.0
N A:LEU849 4.0 171.6 1.0
CB A:GLU835 4.1 176.8 1.0
CA A:LEU849 4.1 171.6 1.0
CA A:CA2810 4.1 176.0 1.0
CA A:ASP843 4.2 177.3 1.0
CB A:LEU849 4.2 171.6 1.0
N A:ASP847 4.2 174.2 1.0
CB A:ASP843 4.3 177.3 1.0
OD2 A:ASP843 4.3 177.3 1.0
N A:ASP845 4.3 177.6 1.0
OE2 A:GLU835 4.3 176.8 1.0
CG A:GLU835 4.4 176.8 1.0
C A:ASP843 4.4 177.3 1.0
OD1 A:ASP854 4.4 171.9 1.0
CB A:ASP847 4.5 174.2 1.0
N A:ASN844 4.5 178.1 1.0
N A:VAL850 4.5 174.5 1.0
CB A:ASP845 4.6 177.6 1.0
N A:GLY846 4.6 176.6 1.0
CA A:ASP847 4.7 174.2 1.0
CA A:VAL850 4.8 174.5 1.0
N A:GLY848 4.8 172.6 1.0
CA A:ASP845 4.8 177.6 1.0
C A:ASP845 4.9 177.6 1.0
C A:ASP847 4.9 174.2 1.0

Calcium binding site 3 out of 3 in 7bao

Go back to Calcium Binding Sites List in 7bao
Calcium binding site 3 out of 3 in the Human TENEURIN4 Mut C1


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 3 of Human TENEURIN4 Mut C1 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca2810

b:176.0
occ:1.00
OD2 A:ASP847 2.3 174.2 1.0
OD2 A:ASP856 2.3 172.3 1.0
OD2 A:ASP845 2.3 177.6 1.0
OD1 A:ASP854 2.5 171.9 1.0
OD2 A:ASP854 2.5 171.9 1.0
CG A:ASP854 2.8 171.9 1.0
CG A:ASP856 3.2 172.3 1.0
CG A:ASP847 3.3 174.2 1.0
CG A:ASP845 3.4 177.6 1.0
OD1 A:ASP856 3.7 172.3 1.0
OD1 A:ASP845 3.7 177.6 1.0
OD1 A:ASP847 3.9 174.2 1.0
CA A:CA2809 4.1 176.9 1.0
CB A:ASP856 4.2 172.3 1.0
CB A:ASP847 4.3 174.2 1.0
CB A:ASP854 4.3 171.9 1.0
N A:GLU835 4.3 176.8 1.0
CB A:ASP845 4.7 177.6 1.0
CA A:MET834 4.7 175.0 1.0
CB A:GLU835 4.7 176.8 1.0
N A:ASP856 4.8 172.3 1.0

Reference:

D.H.Meijer, C.P.Frias, J.W.Beugelink, Y.N.Deurloo, B.J.C.Janssen. TENEURIN4 Dimer Structures Reveal A Calcium-Stabilized Compact Conformation Supporting Homomeric Trans-Interactions. Embo J. V. 41 07505 2022.
ISSN: ESSN 1460-2075
PubMed: 35099835
DOI: 10.15252/EMBJ.2020107505
Page generated: Thu Jul 18 23:14:11 2024

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