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Calcium in PDB 7blg: Structure of Cbm BT3015C From Bacteroides Thetaiotaomicron in Complex with Galactose

Protein crystallography data

The structure of Structure of Cbm BT3015C From Bacteroides Thetaiotaomicron in Complex with Galactose, PDB code: 7blg was solved by R.L.Costa, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 36.40 / 1.18
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 36.853, 34.524, 47.746, 90, 98.95, 90
R / Rfree (%) 15.7 / 17.4

Calcium Binding Sites:

The binding sites of Calcium atom in the Structure of Cbm BT3015C From Bacteroides Thetaiotaomicron in Complex with Galactose (pdb code 7blg). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Structure of Cbm BT3015C From Bacteroides Thetaiotaomicron in Complex with Galactose, PDB code: 7blg:

Calcium binding site 1 out of 1 in 7blg

Go back to Calcium Binding Sites List in 7blg
Calcium binding site 1 out of 1 in the Structure of Cbm BT3015C From Bacteroides Thetaiotaomicron in Complex with Galactose


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Structure of Cbm BT3015C From Bacteroides Thetaiotaomicron in Complex with Galactose within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca202

b:12.3
occ:1.00
O A:ASP48 2.3 14.9 1.0
O A:LYS43 2.3 12.8 1.0
O A:ALA155 2.4 12.2 1.0
OE2 A:GLU156 2.4 14.3 1.0
O A:THR51 2.4 12.3 1.0
OG1 A:THR51 2.5 14.1 1.0
OD1 A:ASP46 2.5 14.6 1.0
C A:THR51 3.4 11.3 1.0
CD A:GLU156 3.4 14.3 1.0
C A:ASP48 3.4 13.8 1.0
CG A:ASP46 3.5 14.2 1.0
C A:LYS43 3.5 12.1 1.0
C A:ALA155 3.6 11.4 1.0
CB A:THR51 3.7 13.7 1.0
CG A:GLU156 3.8 13.3 1.0
OD2 A:ASP46 3.8 16.1 1.0
CA A:THR51 3.9 13.2 1.0
N A:THR51 4.0 13.3 1.0
N A:ASP48 4.0 15.4 1.0
CA A:ASP48 4.1 15.5 1.0
CA A:SER44 4.1 13.9 1.0
CB A:ASP48 4.2 16.8 1.0
N A:SER44 4.3 11.7 1.0
CA A:ALA155 4.4 11.4 1.0
N A:LEU52 4.5 12.4 1.0
N A:TYR49 4.5 14.4 1.0
OE1 A:GLU156 4.5 14.6 1.0
N A:GLU156 4.6 11.7 1.0
N A:ASP46 4.6 13.7 1.0
CA A:LYS43 4.6 13.9 1.0
C A:SER44 4.6 12.1 1.0
CA A:TYR49 4.7 14.6 1.0
CA A:GLU156 4.7 11.7 1.0
CB A:ASP46 4.8 15.9 1.0
N A:PHE45 4.9 13.3 1.0
CG2 A:THR51 4.9 15.9 1.0
CB A:GLU156 4.9 12.4 1.0
N A:GLY47 4.9 15.3 1.0
CA A:LEU52 4.9 12.4 1.0
C A:TYR49 4.9 15.0 1.0
CB A:LYS43 5.0 12.9 1.0

Reference:

R.L.Costa, V.G.Correia. Structural Basis For Mucin-Type O-Glycan Recognition By Proteins of A Bacteroides Thetaiotaomicron Polysaccharide Utilization Loci To Be Published.
Page generated: Thu Jul 18 23:19:02 2024

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