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Calcium in PDB 7blz: Red Alga C.Merolae Photosystem I

Enzymatic activity of Red Alga C.Merolae Photosystem I

All present enzymatic activity of Red Alga C.Merolae Photosystem I:
1.97.1.12;

Other elements in 7blz:

The structure of Red Alga C.Merolae Photosystem I also contains other interesting chemical elements:

Magnesium (Mg) 133 atoms
Iron (Fe) 12 atoms

Calcium Binding Sites:

The binding sites of Calcium atom in the Red Alga C.Merolae Photosystem I (pdb code 7blz). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the Red Alga C.Merolae Photosystem I, PDB code: 7blz:
Jump to Calcium binding site number: 1; 2;

Calcium binding site 1 out of 2 in 7blz

Go back to Calcium Binding Sites List in 7blz
Calcium binding site 1 out of 2 in the Red Alga C.Merolae Photosystem I


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Red Alga C.Merolae Photosystem I within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Ca852

b:52.5
occ:1.00
HE2 B:HIS204 1.8 41.6 1.0
HD2 B:HIS204 2.1 41.6 1.0
NE2 B:HIS204 2.3 41.6 1.0
CD2 B:HIS204 2.4 41.6 1.0
OE2 B:GLU132 2.4 37.9 1.0
OE1 B:GLU132 2.4 37.9 1.0
CD B:GLU132 2.7 37.9 1.0
O B:GLY126 3.0 32.7 1.0
H B:ARG128 3.5 33.9 1.0
CE1 B:HIS204 3.6 41.6 1.0
CG B:HIS204 3.7 41.6 1.0
HA B:ILE127 3.7 33.9 1.0
HB2 B:ARG128 3.8 33.9 1.0
O2D B:CLA813 3.9 35.8 1.0
HED1 B:CLA813 3.9 35.8 1.0
HED3 B:CLA813 3.9 35.8 1.0
HG2 B:ARG128 4.1 33.9 1.0
HE1 B:HIS204 4.1 41.6 1.0
CED B:CLA813 4.1 35.8 1.0
N B:ARG128 4.1 33.9 1.0
C B:GLY126 4.2 32.7 1.0
CG B:GLU132 4.2 37.9 1.0
ND1 B:HIS204 4.2 41.6 1.0
HG3 B:ARG128 4.5 33.9 1.0
HG13 B:VAL195 4.5 33.9 1.0
CB B:ARG128 4.5 33.9 1.0
CA B:ILE127 4.5 33.9 1.0
HG2 B:GLU132 4.5 37.9 1.0
HG3 B:GLU132 4.5 37.9 1.0
CG B:ARG128 4.6 33.9 1.0
O1D B:CLA813 4.6 35.8 1.0
CGD B:CLA813 4.6 35.8 1.0
HD22 B:ASN129 4.6 36.9 1.0
C B:ILE127 4.7 33.9 1.0
HB2 B:ALA199 4.8 35.0 1.0
HG11 B:VAL195 4.8 33.9 1.0
HD21 B:ASN129 4.8 36.9 1.0
N B:ILE127 4.8 33.9 1.0
O B:VAL205 4.8 39.7 1.0
ND2 B:ASN129 4.8 36.9 1.0
HB2 B:HIS204 4.9 41.6 1.0
H B:ASN129 4.9 36.9 1.0
CB B:HIS204 4.9 41.6 1.0
HG12 B:VAL195 4.9 33.9 1.0
CA B:ARG128 4.9 33.9 1.0
HB3 B:GLU132 5.0 37.9 1.0
CG1 B:VAL195 5.0 33.9 1.0
HA B:HIS204 5.0 41.6 1.0

Calcium binding site 2 out of 2 in 7blz

Go back to Calcium Binding Sites List in 7blz
Calcium binding site 2 out of 2 in the Red Alga C.Merolae Photosystem I


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Red Alga C.Merolae Photosystem I within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Ca853

b:53.6
occ:1.00
HA3 B:GLY206 2.1 40.6 1.0
C B:GLY206 2.2 40.6 1.0
N B:TRP207 2.2 40.8 1.0
N B:ASP208 2.2 45.0 1.0
H B:TRP207 2.4 40.8 1.0
CA B:GLY206 2.5 40.6 1.0
HB2 B:ASP208 2.7 45.0 1.0
O B:GLY206 2.8 40.6 1.0
H B:ASN209 3.0 40.9 1.0
C B:TRP207 3.0 40.8 1.0
CA B:TRP207 3.1 40.8 1.0
CA B:ASP208 3.2 45.0 1.0
HA2 B:GLY206 3.3 40.6 1.0
H B:GLY206 3.3 40.6 1.0
CB B:ASP208 3.3 45.0 1.0
N B:GLY206 3.4 40.6 1.0
HB2 B:TRP207 3.5 40.8 1.0
N B:ASN209 3.6 40.9 1.0
OD1 B:ASN209 3.7 40.9 1.0
CB B:TRP207 3.9 40.8 1.0
HA B:TRP207 3.9 40.8 1.0
HG32 B:DGD850 3.9 48.1 1.0
CG B:ASP208 3.9 45.0 1.0
C B:ASP208 4.0 45.0 1.0
HA B:ASP208 4.0 45.0 1.0
HB3 B:ASP208 4.2 45.0 1.0
O B:TRP207 4.2 40.8 1.0
OD1 B:ASP208 4.3 45.0 1.0
H B:PHE210 4.5 39.9 1.0
HD1 B:TRP207 4.5 40.8 1.0
OBD B:CLA813 4.6 35.8 1.0
OD2 B:ASP208 4.6 45.0 1.0
HB3 B:TRP207 4.6 40.8 1.0
CG B:ASN209 4.6 40.9 1.0
HMD2 B:CLA813 4.7 35.8 1.0
CG B:TRP207 4.7 40.8 1.0
C B:VAL205 4.7 39.7 1.0
CD1 B:TRP207 4.9 40.8 1.0
CA B:ASN209 4.9 40.9 1.0
HD1 B:DGD850 4.9 48.1 1.0
C3G B:DGD850 5.0 48.1 1.0
HE1 B:HIS204 5.0 41.6 1.0

Reference:

N.Nelson, D.Klaiman, M.Hippler. Red Alga C.Merolae Photosystem I To Be Published.
Page generated: Wed Jul 9 21:01:25 2025

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