Calcium in PDB 7edn: Crystal Structure of the Eukaryotic Decoding Site in Complex with Ag(I)

The structure of Crystal Structure of the Eukaryotic Decoding Site in Complex with Ag(I), PDB code: 7edn was solved by J.Kondo, C.Suzuki, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	36.84 / 2.60
Space group	C 1 2 1
Cell size a, b, c (Å), α, β, γ (°)	51.176, 28.102, 37.711, 90, 102.35, 90
R / Rfree (%)	18.8 / 25.2

The structure of Crystal Structure of the Eukaryotic Decoding Site in Complex with Ag(I) also contains other interesting chemical elements:

Silver

(Ag)

2 atoms

The binding sites of Calcium atom in the Crystal Structure of the Eukaryotic Decoding Site in Complex with Ag(I) (pdb code 7edn). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Crystal Structure of the Eukaryotic Decoding Site in Complex with Ag(I), PDB code: 7edn:

Calcium binding site 1 out of 1 in the Crystal Structure of the Eukaryotic Decoding Site in Complex with Ag(I)


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of the Eukaryotic Decoding Site in Complex with Ag(I) within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca103 b:75.7 occ:1.00 OP1 A:G19 2.3 62.7 1.0 OP2 A:A18 2.3 53.5 1.0 P A:A18 3.8 63.3 1.0 P A:G19 3.8 56.7 1.0 O4 A:U20 4.3 77.3 1.0 C5' A:A18 4.4 52.2 1.0 N7 A:G19 4.4 64.7 1.0 O3' A:A18 4.6 61.5 1.0 O5' A:A18 4.6 60.7 1.0 OP1 A:A18 4.7 69.8 1.0 O5' A:G19 4.7 59.4 1.0 O3' A:A17 4.7 51.9 1.0 C2' A:A17 4.7 51.4 1.0 OP2 A:G19 4.7 67.2 1.0 C3' A:A17 4.8 56.1 1.0 C8 A:G19 4.9 67.9 1.0

J.Kondo, C.Suzuki. Crystal Structure of the Eukaryotic Decoding Site in Complex with Ag(I) To Be Published.