Atomistry » Calcium » PDB 7et8-7f9d » 7f4d
Atomistry »
  Calcium »
    PDB 7et8-7f9d »
      7f4d »

Calcium in PDB 7f4d: Cryo-Em Structure of Alpha-Msh-Bound Melanocortin-1 Receptor in Complex with Gs Protein and NB35

Calcium Binding Sites:

The binding sites of Calcium atom in the Cryo-Em Structure of Alpha-Msh-Bound Melanocortin-1 Receptor in Complex with Gs Protein and NB35 (pdb code 7f4d). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Cryo-Em Structure of Alpha-Msh-Bound Melanocortin-1 Receptor in Complex with Gs Protein and NB35, PDB code: 7f4d:

Calcium binding site 1 out of 1 in 7f4d

Go back to Calcium Binding Sites List in 7f4d
Calcium binding site 1 out of 1 in the Cryo-Em Structure of Alpha-Msh-Bound Melanocortin-1 Receptor in Complex with Gs Protein and NB35


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Cryo-Em Structure of Alpha-Msh-Bound Melanocortin-1 Receptor in Complex with Gs Protein and NB35 within 5.0Å range:
probe atom residue distance (Å) B Occ
R:Ca501

b:139.1
occ:1.00
OD1 R:ASP117 2.0 145.4 1.0
O M:GLU5 2.1 144.6 1.0
OD2 R:ASP121 2.5 137.1 1.0
OD1 R:ASP121 2.8 137.1 1.0
OE1 R:GLU94 3.0 149.3 1.0
CG R:ASP121 3.0 137.1 1.0
C M:GLU5 3.0 144.6 1.0
CG R:ASP117 3.0 145.4 1.0
CB M:GLU5 3.3 144.6 1.0
NH1 M:ARG8 3.4 131.0 1.0
OE2 R:GLU94 3.4 149.3 1.0
OD2 R:ASP117 3.4 145.4 1.0
CA M:GLU5 3.5 144.6 1.0
CD R:GLU94 3.5 149.3 1.0
CA M:PHE7 3.6 134.2 1.0
N M:GLU5 3.7 144.6 1.0
C M:PHE7 3.8 134.2 1.0
N M:PHE7 3.8 134.2 1.0
N M:HIS6 4.1 142.0 1.0
N M:ARG8 4.2 131.0 1.0
C M:HIS6 4.2 142.0 1.0
O R:ASP117 4.2 145.4 1.0
O M:PHE7 4.2 134.2 1.0
CZ M:ARG8 4.3 131.0 1.0
CB R:ASP117 4.3 145.4 1.0
CB R:ASP121 4.5 137.1 1.0
CG M:GLU5 4.5 144.6 1.0
CA M:HIS6 4.6 142.0 1.0
CA R:ASP117 4.7 145.4 1.0
C R:ASP117 4.7 145.4 1.0
NH2 M:ARG8 4.7 131.0 1.0
OE1 M:GLU5 4.7 144.6 1.0
O M:HIS6 4.7 142.0 1.0
C M:MET4 4.8 151.8 1.0
CB M:PHE7 4.9 134.2 1.0
CA M:ARG8 5.0 131.0 1.0
CG R:GLU94 5.0 149.3 1.0
CD1 M:PHE7 5.0 134.2 1.0

Reference:

S.Ma, Y.Chen, A.Dai, W.Yin, J.Guo, D.Yang, F.Zhou, Y.Jiang, M.W.Wang, H.E.Xu. Structural Mechanism of Calcium-Mediated Hormone Recognition and G Beta Interaction By the Human Melanocortin-1 Receptor. Cell Res. 2021.
ISSN: ISSN 1001-0602
PubMed: 34453129
DOI: 10.1038/S41422-021-00557-Y
Page generated: Fri Jul 19 00:35:06 2024

Last articles

Zn in 9MJ5
Zn in 9HNW
Zn in 9G0L
Zn in 9FNE
Zn in 9DZN
Zn in 9E0I
Zn in 9D32
Zn in 9DAK
Zn in 8ZXC
Zn in 8ZUF
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy