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Calcium in PDB 7po7: Phosphoglycolate Phosphatase From Mus Musculus

Enzymatic activity of Phosphoglycolate Phosphatase From Mus Musculus

All present enzymatic activity of Phosphoglycolate Phosphatase From Mus Musculus:
3.1.3.21; 3.1.3.48;

Protein crystallography data

The structure of Phosphoglycolate Phosphatase From Mus Musculus, PDB code: 7po7 was solved by J.Schloetzer, H.Schindelin, S.Fratz, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.97 / 2.31
Space group P 1
Cell size a, b, c (Å), α, β, γ (°) 84.262, 91.197, 101.317, 103.46, 89.98, 104.63
R / Rfree (%) 20.8 / 23

Calcium Binding Sites:

The binding sites of Calcium atom in the Phosphoglycolate Phosphatase From Mus Musculus (pdb code 7po7). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Phosphoglycolate Phosphatase From Mus Musculus, PDB code: 7po7:

Calcium binding site 1 out of 1 in 7po7

Go back to Calcium Binding Sites List in 7po7
Calcium binding site 1 out of 1 in the Phosphoglycolate Phosphatase From Mus Musculus


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Phosphoglycolate Phosphatase From Mus Musculus within 5.0Å range:
probe atom residue distance (Å) B Occ
H:Ca406

b:57.5
occ:1.00
HG1 H:THR198 2.5 66.0 1.0
OG H:SER70 2.8 65.3 1.0
HG H:SER70 2.9 79.2 1.0
HG1 H:THR215 2.9 75.5 1.0
H H:SER70 3.0 60.1 1.0
OG1 H:THR198 3.1 54.4 1.0
OD1 H:ASN199 3.2 76.4 1.0
HB3 H:SER70 3.2 73.2 1.0
H H:PHE172 3.3 64.2 1.0
HB2 H:PHE172 3.3 56.0 1.0
O H:ASN68 3.4 86.2 1.0
CB H:SER70 3.5 60.3 1.0
HG1 H:THR101 3.5 77.4 1.0
N H:SER70 3.6 49.4 1.0
HA H:ASN69 3.6 82.3 1.0
HB H:THR198 3.6 64.5 1.0
OG1 H:THR215 3.7 62.3 1.0
CB H:THR198 3.9 53.1 1.0
N H:PHE172 3.9 52.8 1.0
HG21 H:THR198 4.0 58.7 1.0
CB H:PHE172 4.1 46.0 1.0
CG H:ASN199 4.1 72.5 1.0
CA H:SER70 4.2 54.7 1.0
OG1 H:THR101 4.2 63.8 1.0
HB3 H:PHE172 4.2 56.0 1.0
HA2 H:GLY171 4.3 61.0 1.0
HG21 H:THR215 4.3 85.5 1.0
HB2 H:SER70 4.3 73.2 1.0
C H:ASN69 4.3 52.6 1.0
CA H:ASN69 4.3 67.9 1.0
HD21 H:ASN199 4.5 90.5 1.0
CG2 H:THR198 4.5 48.3 1.0
C H:ASN68 4.5 79.5 1.0
CA H:PHE172 4.6 52.7 1.0
HB H:THR215 4.6 76.1 1.0
C H:GLY171 4.7 51.6 1.0
CB H:THR215 4.7 62.8 1.0
HA3 H:GLY171 4.7 61.0 1.0
ND2 H:ASN199 4.7 74.8 1.0
HG21 H:THR101 4.7 71.9 1.0
CA H:GLY171 4.8 50.1 1.0
HB H:THR101 4.8 66.2 1.0
HA H:SER70 4.8 66.5 1.0
O H:HOH508 4.9 43.0 1.0
HA H:PHE172 4.9 64.0 1.0
N H:ASN69 4.9 72.1 1.0
CG2 H:THR215 5.0 70.6 1.0
HB3 H:ASN199 5.0 84.3 1.0

Reference:

J.Schloetzer, E.Jeanclos, H.Schindelin, A.Gohla, S.Fratz. Discovery of A Small-Molecule Inhibitor of the Metabolic Damage Control Enzyme Phosphoglycolate Phosphatase To Be Published.
Page generated: Thu Jul 10 00:21:08 2025

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