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Calcium in PDB 7svj: Bile Salt Hydrolase From Lactobacillus Ingluviei

Protein crystallography data

The structure of Bile Salt Hydrolase From Lactobacillus Ingluviei, PDB code: 7svj was solved by M.E.Walker, S.Patel, M.R.Redinbo, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 42.12 / 1.43
Space group I 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 90.636, 43.81, 155.06, 90, 99.36, 90
R / Rfree (%) 17.7 / 20.3

Calcium Binding Sites:

The binding sites of Calcium atom in the Bile Salt Hydrolase From Lactobacillus Ingluviei (pdb code 7svj). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the Bile Salt Hydrolase From Lactobacillus Ingluviei, PDB code: 7svj:
Jump to Calcium binding site number: 1; 2;

Calcium binding site 1 out of 2 in 7svj

Go back to Calcium Binding Sites List in 7svj
Calcium binding site 1 out of 2 in the Bile Salt Hydrolase From Lactobacillus Ingluviei


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Bile Salt Hydrolase From Lactobacillus Ingluviei within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Ca404

b:20.9
occ:0.80
O B:GLN109 2.3 22.1 1.0
OE2 B:GLU115 2.3 24.4 1.0
O B:HOH614 2.4 30.3 1.0
O B:HOH682 2.5 33.5 1.0
O B:HOH544 2.6 30.0 1.0
CD B:GLU115 3.4 26.4 1.0
C B:GLN109 3.5 20.6 1.0
OE1 B:GLU115 3.9 23.0 1.0
O B:HOH709 4.1 37.9 1.0
CA B:GLN109 4.3 22.1 1.0
CB B:GLN109 4.4 26.0 1.0
N B:ALA110 4.5 18.4 1.0
CA B:ALA110 4.6 19.3 1.0
CG B:GLU115 4.6 24.4 1.0
OH B:TYR50 4.7 23.1 1.0
O B:HOH712 4.7 30.8 1.0

Calcium binding site 2 out of 2 in 7svj

Go back to Calcium Binding Sites List in 7svj
Calcium binding site 2 out of 2 in the Bile Salt Hydrolase From Lactobacillus Ingluviei


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Bile Salt Hydrolase From Lactobacillus Ingluviei within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Ca405

b:43.5
occ:1.00
O B:HOH713 2.4 38.9 1.0
O B:HOH721 2.4 35.2 1.0
O B:HOH555 2.5 28.8 1.0
O B:HOH534 2.5 33.7 1.0
O B:HOH741 3.2 40.3 1.0
NZ B:LYS179 4.3 26.3 1.0
O B:HOH692 4.4 32.5 1.0
O B:HOH702 4.5 28.6 1.0
OD2 B:ASP178 4.5 31.1 1.0
OD2 B:ASP157 4.5 23.9 1.0
OD2 B:ASP159 4.5 35.4 1.0
OD1 B:ASP178 4.7 22.9 1.0
OG B:SER176 4.9 24.7 1.0
CG B:ASP178 5.0 24.2 1.0

Reference:

M.E.Walker, M.R.Redinbo. Structural Diversity of Bile Salt Hydrolases From Lactobacillus Reveals Rationale For Substrate Selectivity To Be Published.
Page generated: Thu Jul 10 01:09:07 2025

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