Calcium in PDB 8g7y: Cryo-Em Structure of Full Length Neuroligin-2 From Mouse with Neurexin-1 Beta

The binding sites of Calcium atom in the Cryo-Em Structure of Full Length Neuroligin-2 From Mouse with Neurexin-1 Beta (pdb code 8g7y). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Cryo-Em Structure of Full Length Neuroligin-2 From Mouse with Neurexin-1 Beta, PDB code: 8g7y:

Calcium binding site 1 out of 1 in the Cryo-Em Structure of Full Length Neuroligin-2 From Mouse with Neurexin-1 Beta


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Cryo-Em Structure of Full Length Neuroligin-2 From Mouse with Neurexin-1 Beta within 5.0Å range: probe atom residue distance (Å) B Occ C:Ca501 b:145.2 occ:1.00 O C:VAL154 2.1 169.6 1.0 ND2 C:ASN238 2.3 141.1 1.0 OD2 C:ASP137 2.3 162.6 1.0 HA3 C:GLY155 2.4 168.9 1.0 HD22 C:ASN238 2.4 141.1 1.0 OD1 C:ASP137 2.7 162.6 1.0 CG C:ASP137 2.8 162.6 1.0 CA C:GLY155 3.1 168.9 1.0 HA2 C:GLY155 3.1 168.9 1.0 C C:VAL154 3.1 169.6 1.0 N C:GLY155 3.5 168.9 1.0 CG C:ASN238 3.5 141.1 1.0 O C:ILE236 3.9 148.5 1.0 HG22 C:VAL154 4.0 169.6 1.0 OD1 C:ASN238 4.0 141.1 1.0 H C:ASN238 4.1 141.1 1.0 CB C:LEU234 4.2 165.3 1.0 O A:GLN370 4.3 123.4 1.0 HG23 C:VAL154 4.3 169.6 1.0 H C:GLY155 4.3 168.9 1.0 CB C:ASP137 4.3 162.6 1.0 CA C:VAL154 4.4 169.6 1.0 C C:GLY155 4.4 168.9 1.0 HE2 A:TYR474 4.4 119.2 1.0 HA C:VAL154 4.4 169.6 1.0 CG2 C:VAL154 4.6 169.6 1.0 HB2 C:ASN238 4.6 141.1 1.0 HB3 C:ASP137 4.6 162.6 1.0 CB C:ASN238 4.7 141.1 1.0 HB2 C:ASP137 4.7 162.6 1.0 HG13 C:VAL154 4.8 169.6 1.0 OE2 A:GLU372 4.8 128.6 1.0 O C:GLY155 4.9 168.9 1.0 H C:ASP137 5.0 162.6 1.0 N C:ASN238 5.0 141.1 1.0 H C:ILE236 5.0 148.5 1.0 HH A:TYR474 5.0 119.2 1.0

R.Boyd, W.Wang. Cryo-Em Structure of Full Length Mouse Neuroligin-2 with A Singe Neurexin-1 Beta at 3.92 Angstroms To Be Published.