Atomistry » Calcium » PDB 8ica-8iww » 8itg
Atomistry »
  Calcium »
    PDB 8ica-8iww »
      8itg »

Calcium in PDB 8itg: Crystal Structure of Lasso Peptide Epimerase Mslh in Complexed with Precursor Peptide Variant MSLAW21G

Protein crystallography data

The structure of Crystal Structure of Lasso Peptide Epimerase Mslh in Complexed with Precursor Peptide Variant MSLAW21G, PDB code: 8itg was solved by Y.Nakashima, M.Hiroyuki, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 44.98 / 2.25
Space group I 4 2 2
Cell size a, b, c (Å), α, β, γ (°) 127.232, 127.232, 170.611, 90, 90, 90
R / Rfree (%) 18.2 / 20.7

Calcium Binding Sites:

The binding sites of Calcium atom in the Crystal Structure of Lasso Peptide Epimerase Mslh in Complexed with Precursor Peptide Variant MSLAW21G (pdb code 8itg). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Crystal Structure of Lasso Peptide Epimerase Mslh in Complexed with Precursor Peptide Variant MSLAW21G, PDB code: 8itg:

Calcium binding site 1 out of 1 in 8itg

Go back to Calcium Binding Sites List in 8itg
Calcium binding site 1 out of 1 in the Crystal Structure of Lasso Peptide Epimerase Mslh in Complexed with Precursor Peptide Variant MSLAW21G


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of Lasso Peptide Epimerase Mslh in Complexed with Precursor Peptide Variant MSLAW21G within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca602

b:48.4
occ:1.00
OE2 A:GLU44 2.2 49.0 1.0
OD1 A:ASN87 2.3 36.1 1.0
O A:HOH720 2.3 35.0 1.0
NE2 A:HIS261 2.3 39.3 1.0
NE2 A:HIS259 2.4 39.3 1.0
O B:GLY21 2.5 108.3 1.0
CE1 A:HIS261 3.0 42.5 1.0
CE1 A:HIS259 3.1 39.8 1.0
CG A:ASN87 3.2 34.3 1.0
CD A:GLU44 3.3 47.5 1.0
C B:GLY21 3.4 108.2 1.0
OXT B:GLY21 3.4 108.0 1.0
ND2 A:ASN87 3.5 34.8 1.0
CD2 A:HIS261 3.5 43.4 1.0
CD2 A:HIS259 3.5 37.8 1.0
OE1 A:GLU44 3.8 51.0 1.0
CD2 A:HIS88 4.2 36.2 1.0
ND1 A:HIS261 4.2 45.3 1.0
O A:GLY293 4.3 42.2 1.0
ND1 A:HIS259 4.3 39.6 1.0
CG A:GLU44 4.4 48.9 1.0
O B:PHE20 4.5 128.2 1.0
CG A:HIS261 4.5 44.6 1.0
OD2 A:ASP11 4.5 43.9 1.0
CG A:HIS259 4.6 36.2 1.0
CA A:GLY293 4.6 37.2 1.0
CB A:ASN87 4.6 32.5 1.0
CE1 A:HIS295 4.6 49.9 1.0
NE2 A:HIS295 4.7 50.4 1.0
N A:ASN87 4.7 35.9 1.0
NE2 A:HIS88 4.8 38.4 1.0
CA B:GLY21 4.8 133.5 1.0
C A:GLY293 4.9 40.2 1.0

Reference:

Y.Nakashima, M.Hiroyuki. Crystal Structure of Lasso Peptide Epimerase Mslh in Complexed with Precursor Peptide Variant MSLAW21G To Be Published.
Page generated: Thu Jul 10 05:23:52 2025

Last articles

Mg in 5JYE
Mg in 5JY6
Mg in 5JY4
Mg in 5JXZ
Mg in 5JWC
Mg in 5JXS
Mg in 5JXM
Mg in 5JWB
Mg in 5JWA
Mg in 5JVL
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy