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Calcium in PDB 8jo3: Cryo-Em Structure of A Legionella Effector Complexed with Actin and Amp

Calcium Binding Sites:

The binding sites of Calcium atom in the Cryo-Em Structure of A Legionella Effector Complexed with Actin and Amp (pdb code 8jo3). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Cryo-Em Structure of A Legionella Effector Complexed with Actin and Amp, PDB code: 8jo3:

Calcium binding site 1 out of 1 in 8jo3

Go back to Calcium Binding Sites List in 8jo3
Calcium binding site 1 out of 1 in the Cryo-Em Structure of A Legionella Effector Complexed with Actin and Amp


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Cryo-Em Structure of A Legionella Effector Complexed with Actin and Amp within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Ca401

b:56.2
occ:1.00
O1G B:ATP402 2.3 38.0 1.0
O2B B:ATP402 2.7 32.6 1.0
PG B:ATP402 3.6 32.8 1.0
PB B:ATP402 3.8 16.0 1.0
O3B B:ATP402 3.9 29.4 1.0
O1A B:ATP402 4.0 28.4 1.0
OD2 B:ASP13 4.0 35.8 1.0
O3A B:ATP402 4.2 21.4 1.0
O3G B:ATP402 4.3 29.4 1.0
OD1 B:ASP13 4.3 32.9 1.0
OD1 B:ASP156 4.3 33.3 1.0
OD2 B:ASP156 4.3 27.0 1.0
CG2 B:VAL341 4.4 13.0 1.0
CG B:GLN139 4.6 18.0 1.0
CG B:ASP13 4.6 31.2 1.0
PA B:ATP402 4.6 22.8 1.0
CD B:GLN139 4.6 21.8 1.0
CG B:ASP156 4.7 32.7 1.0
CA B:GLY15 4.7 30.6 1.0
O2G B:ATP402 4.8 29.3 1.0
CA B:GLY158 4.9 27.6 1.0
NE2 B:GLN139 4.9 23.1 1.0
NZ B:LYS20 4.9 25.0 1.0
OE1 B:GLN139 4.9 22.3 1.0

Reference:

X.T.Zhou, X.F.Wang, J.X.Tan, Y.Q.Zhu. Cryo-Em Structure of A Legionella Effector Complexed with Actin and Amp To Be Published.
Page generated: Thu Jul 10 05:32:06 2025

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