Calcium in PDB 8qsp: MUC5AC D3 Assembly. Snp RS36189285: ARG996GLN.
Calcium Binding Sites:
The binding sites of Calcium atom in the MUC5AC D3 Assembly. Snp RS36189285: ARG996GLN.
(pdb code 8qsp). This binding sites where shown within
5.0 Angstroms radius around Calcium atom.
In total 4 binding sites of Calcium where determined in the
MUC5AC D3 Assembly. Snp RS36189285: ARG996GLN., PDB code: 8qsp:
Jump to Calcium binding site number:
1;
2;
3;
4;
Calcium binding site 1 out
of 4 in 8qsp
Go back to
Calcium Binding Sites List in 8qsp
Calcium binding site 1 out
of 4 in the MUC5AC D3 Assembly. Snp RS36189285: ARG996GLN.
 Mono view
 Stereo pair view
|
|
A full contact list of Calcium with other atoms in the Ca binding
site number 1 of MUC5AC D3 Assembly. Snp RS36189285: ARG996GLN. within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Ca1401
b:221.2
occ:1.00
|
OD1
|
A:ASN1038
|
2.2
|
187.3
|
1.0
|
|
O
|
A:ILE1042
|
2.2
|
203.8
|
1.0
|
|
OD2
|
A:ASP1046
|
2.3
|
195.6
|
1.0
|
|
OD1
|
A:ASN1045
|
2.3
|
201.3
|
1.0
|
|
OD1
|
A:ASP1040
|
2.3
|
193.7
|
1.0
|
|
OD2
|
A:ASP915
|
2.4
|
180.1
|
1.0
|
|
CG
|
A:ASP1046
|
2.5
|
195.6
|
1.0
|
|
OD1
|
A:ASP1046
|
2.5
|
195.6
|
1.0
|
|
CG
|
A:ASN1038
|
3.1
|
187.3
|
1.0
|
|
ND2
|
A:ASN1038
|
3.3
|
187.3
|
1.0
|
|
CG
|
A:ASP915
|
3.4
|
180.1
|
1.0
|
|
CG
|
A:ASP1040
|
3.4
|
193.7
|
1.0
|
|
CG
|
A:ASN1045
|
3.4
|
201.3
|
1.0
|
|
C
|
A:ILE1042
|
3.5
|
203.8
|
1.0
|
|
N
|
A:ASP1046
|
3.6
|
195.6
|
1.0
|
|
CB
|
A:ASP1046
|
3.7
|
195.6
|
1.0
|
|
OD2
|
A:ASP1040
|
3.7
|
193.7
|
1.0
|
|
CA
|
A:ASP1046
|
3.9
|
195.6
|
1.0
|
|
ND2
|
A:ASN1045
|
3.9
|
201.3
|
1.0
|
|
OD1
|
A:ASP915
|
4.1
|
180.1
|
1.0
|
|
CB
|
A:ASP915
|
4.2
|
180.1
|
1.0
|
|
CA
|
A:ALA1043
|
4.2
|
199.0
|
1.0
|
|
C
|
A:ASN1045
|
4.3
|
201.3
|
1.0
|
|
O
|
A:ALA1043
|
4.3
|
199.0
|
1.0
|
|
N
|
A:ALA1043
|
4.3
|
199.0
|
1.0
|
|
N
|
A:ASP1040
|
4.3
|
193.7
|
1.0
|
|
C
|
A:ALA1043
|
4.3
|
199.0
|
1.0
|
|
CA
|
A:ILE1042
|
4.5
|
203.8
|
1.0
|
|
N
|
A:ASN1038
|
4.5
|
187.3
|
1.0
|
|
CB
|
A:ASN1038
|
4.5
|
187.3
|
1.0
|
|
N
|
A:ASN1045
|
4.5
|
201.3
|
1.0
|
|
N
|
A:ILE1042
|
4.6
|
203.8
|
1.0
|
|
CB
|
A:ASN1045
|
4.6
|
201.3
|
1.0
|
|
O
|
A:ASP1040
|
4.6
|
193.7
|
1.0
|
|
N
|
A:PHE1039
|
4.7
|
185.1
|
1.0
|
|
CB
|
A:ASP1040
|
4.7
|
193.7
|
1.0
|
|
CA
|
A:ASN1045
|
4.7
|
201.3
|
1.0
|
|
C
|
A:ASP1040
|
4.8
|
193.7
|
1.0
|
|
CA
|
A:ASP1040
|
4.8
|
193.7
|
1.0
|
|
CG2
|
A:ILE1042
|
4.8
|
203.8
|
1.0
|
|
CB
|
A:ILE1042
|
4.9
|
203.8
|
1.0
|
|
CA
|
A:ASN1038
|
4.9
|
187.3
|
1.0
|
|
C
|
A:ASN1038
|
5.0
|
187.3
|
1.0
|
|
O
|
A:ASN1045
|
5.0
|
201.3
|
1.0
|
|
Calcium binding site 2 out
of 4 in 8qsp
Go back to
Calcium Binding Sites List in 8qsp
Calcium binding site 2 out
of 4 in the MUC5AC D3 Assembly. Snp RS36189285: ARG996GLN.
 Mono view
 Stereo pair view
|
|
A full contact list of Calcium with other atoms in the Ca binding
site number 2 of MUC5AC D3 Assembly. Snp RS36189285: ARG996GLN. within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Ca1401
b:213.4
occ:1.00
|
OD1
|
B:ASP1040
|
2.2
|
195.3
|
1.0
|
|
OD1
|
B:ASP1046
|
2.3
|
193.8
|
1.0
|
|
OD1
|
B:ASN1045
|
2.3
|
199.9
|
1.0
|
|
OD1
|
B:ASN1038
|
2.3
|
191.9
|
1.0
|
|
OD2
|
B:ASP1040
|
2.5
|
195.3
|
1.0
|
|
O
|
B:ILE1042
|
2.6
|
199.6
|
1.0
|
|
CG
|
B:ASP1040
|
2.7
|
195.3
|
1.0
|
|
OD2
|
B:ASP915
|
2.9
|
187.0
|
1.0
|
|
CG
|
B:ASN1045
|
3.0
|
199.9
|
1.0
|
|
CG
|
B:ASN1038
|
3.1
|
191.9
|
1.0
|
|
CB
|
B:ASN1038
|
3.2
|
191.9
|
1.0
|
|
CG
|
B:ASP1046
|
3.2
|
193.8
|
1.0
|
|
ND2
|
B:ASN1045
|
3.4
|
199.9
|
1.0
|
|
N
|
B:ASP1046
|
3.6
|
193.8
|
1.0
|
|
C
|
B:ILE1042
|
3.7
|
199.6
|
1.0
|
|
N
|
B:ASN1038
|
3.8
|
191.9
|
1.0
|
|
CA
|
B:ASP1046
|
3.8
|
193.8
|
1.0
|
|
C
|
B:ASN1045
|
3.8
|
199.9
|
1.0
|
|
CA
|
B:ASN1038
|
4.0
|
191.9
|
1.0
|
|
OD2
|
B:ASP1046
|
4.0
|
193.8
|
1.0
|
|
CG
|
B:ASP915
|
4.0
|
187.0
|
1.0
|
|
CB
|
B:ASP1046
|
4.1
|
193.8
|
1.0
|
|
CB
|
B:ASP1040
|
4.1
|
195.3
|
1.0
|
|
CB
|
B:ASN1045
|
4.1
|
199.9
|
1.0
|
|
O
|
B:ASN1045
|
4.2
|
199.9
|
1.0
|
|
N
|
B:ASP1040
|
4.3
|
195.3
|
1.0
|
|
CB
|
B:ILE1042
|
4.3
|
199.6
|
1.0
|
|
ND2
|
B:ASN1038
|
4.3
|
191.9
|
1.0
|
|
CA
|
B:ILE1042
|
4.4
|
199.6
|
1.0
|
|
N
|
B:ILE1042
|
4.4
|
199.6
|
1.0
|
|
CA
|
B:ASN1045
|
4.4
|
199.9
|
1.0
|
|
C
|
B:ASN1038
|
4.5
|
191.9
|
1.0
|
|
N
|
B:PHE1039
|
4.5
|
192.0
|
1.0
|
|
N
|
B:ASN1045
|
4.6
|
199.9
|
1.0
|
|
CA
|
B:ASP1040
|
4.7
|
195.3
|
1.0
|
|
CB
|
B:ASP915
|
4.8
|
187.0
|
1.0
|
|
N
|
B:ALA1043
|
4.8
|
191.0
|
1.0
|
|
OD1
|
B:ASP915
|
4.9
|
187.0
|
1.0
|
|
CG2
|
B:ILE1042
|
5.0
|
199.6
|
1.0
|
|
C
|
B:GLY1037
|
5.0
|
183.4
|
1.0
|
|
Calcium binding site 3 out
of 4 in 8qsp
Go back to
Calcium Binding Sites List in 8qsp
Calcium binding site 3 out
of 4 in the MUC5AC D3 Assembly. Snp RS36189285: ARG996GLN.
 Mono view
 Stereo pair view
|
|
A full contact list of Calcium with other atoms in the Ca binding
site number 3 of MUC5AC D3 Assembly. Snp RS36189285: ARG996GLN. within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Ca1401
b:222.5
occ:1.00
|
OD1
|
C:ASP1040
|
2.4
|
208.0
|
1.0
|
|
O
|
C:ASN1038
|
2.4
|
201.0
|
1.0
|
|
O
|
C:ILE1042
|
2.4
|
208.1
|
1.0
|
|
OD2
|
C:ASP915
|
2.4
|
194.7
|
1.0
|
|
OD1
|
C:ASP1046
|
2.6
|
209.8
|
1.0
|
|
OD1
|
C:ASN1045
|
2.6
|
213.8
|
1.0
|
|
OD1
|
C:ASN1038
|
3.0
|
201.0
|
1.0
|
|
CG
|
C:ASP915
|
3.2
|
194.7
|
1.0
|
|
CG
|
C:ASN1038
|
3.5
|
201.0
|
1.0
|
|
CG
|
C:ASP1040
|
3.6
|
208.0
|
1.0
|
|
CG
|
C:ASN1045
|
3.6
|
213.8
|
1.0
|
|
C
|
C:ILE1042
|
3.6
|
208.1
|
1.0
|
|
CG
|
C:ASP1046
|
3.6
|
209.8
|
1.0
|
|
C
|
C:ASN1038
|
3.6
|
201.0
|
1.0
|
|
ND2
|
C:ASN1038
|
3.7
|
201.0
|
1.0
|
|
CB
|
C:ASP915
|
3.8
|
194.7
|
1.0
|
|
ND2
|
C:ASN1045
|
3.8
|
213.8
|
1.0
|
|
N
|
C:ASP1040
|
3.9
|
208.0
|
1.0
|
|
N
|
C:ILE1042
|
4.0
|
208.1
|
1.0
|
|
OD2
|
C:ASP1046
|
4.0
|
209.8
|
1.0
|
|
OD1
|
C:ASP915
|
4.0
|
194.7
|
1.0
|
|
CA
|
C:ILE1042
|
4.2
|
208.1
|
1.0
|
|
OD2
|
C:ASP1040
|
4.3
|
208.0
|
1.0
|
|
CA
|
C:ASN1038
|
4.4
|
201.0
|
1.0
|
|
N
|
C:ASN1038
|
4.4
|
201.0
|
1.0
|
|
CB
|
C:ILE1042
|
4.4
|
208.1
|
1.0
|
|
CB
|
C:ASN1038
|
4.5
|
201.0
|
1.0
|
|
CB
|
C:ASP1040
|
4.5
|
208.0
|
1.0
|
|
N
|
C:PHE1039
|
4.6
|
198.6
|
1.0
|
|
CA
|
C:ASP1040
|
4.6
|
208.0
|
1.0
|
|
N
|
C:ASP1046
|
4.7
|
209.8
|
1.0
|
|
N
|
C:ALA1043
|
4.7
|
206.7
|
1.0
|
|
N
|
C:ASP1041
|
4.7
|
209.5
|
1.0
|
|
CA
|
C:PHE1039
|
4.7
|
198.6
|
1.0
|
|
C
|
C:ASP1040
|
4.8
|
208.0
|
1.0
|
|
C
|
C:PHE1039
|
4.8
|
198.6
|
1.0
|
|
CB
|
C:ASP1046
|
4.8
|
209.8
|
1.0
|
|
C
|
C:ASN1045
|
4.8
|
213.8
|
1.0
|
|
CA
|
C:ASP1046
|
4.9
|
209.8
|
1.0
|
|
CA
|
C:ALA1043
|
4.9
|
206.7
|
1.0
|
|
CB
|
C:ASN1045
|
4.9
|
213.8
|
1.0
|
|
Calcium binding site 4 out
of 4 in 8qsp
Go back to
Calcium Binding Sites List in 8qsp
Calcium binding site 4 out
of 4 in the MUC5AC D3 Assembly. Snp RS36189285: ARG996GLN.
 Mono view
 Stereo pair view
|
|
A full contact list of Calcium with other atoms in the Ca binding
site number 4 of MUC5AC D3 Assembly. Snp RS36189285: ARG996GLN. within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Ca1401
b:195.2
occ:1.00
|
OD1
|
D:ASN1045
|
2.2
|
184.5
|
1.0
|
|
OD1
|
D:ASN1038
|
2.2
|
179.1
|
1.0
|
|
OD1
|
D:ASP1046
|
2.3
|
181.0
|
1.0
|
|
OD1
|
D:ASP915
|
2.4
|
180.5
|
1.0
|
|
OD1
|
D:ASP1040
|
2.4
|
183.1
|
1.0
|
|
CG
|
D:ASN1045
|
2.7
|
184.5
|
1.0
|
|
ND2
|
D:ASN1038
|
2.7
|
179.1
|
1.0
|
|
CG
|
D:ASN1038
|
2.8
|
179.1
|
1.0
|
|
ND2
|
D:ASN1045
|
3.0
|
184.5
|
1.0
|
|
O
|
D:ILE1042
|
3.1
|
191.4
|
1.0
|
|
CG
|
D:ASP1040
|
3.3
|
183.1
|
1.0
|
|
OD2
|
D:ASP1040
|
3.4
|
183.1
|
1.0
|
|
CG
|
D:ASP1046
|
3.6
|
181.0
|
1.0
|
|
C
|
D:ASN1045
|
3.6
|
184.5
|
1.0
|
|
CG
|
D:ASP915
|
3.6
|
180.5
|
1.0
|
|
N
|
D:ASP1046
|
3.7
|
181.0
|
1.0
|
|
O
|
D:ASN1045
|
3.7
|
184.5
|
1.0
|
|
CB
|
D:ASN1045
|
3.8
|
184.5
|
1.0
|
|
CA
|
D:ASN1045
|
4.0
|
184.5
|
1.0
|
|
C
|
D:ILE1042
|
4.1
|
191.4
|
1.0
|
|
CA
|
D:ASP1046
|
4.1
|
181.0
|
1.0
|
|
N
|
D:ASN1045
|
4.2
|
184.5
|
1.0
|
|
CB
|
D:ASN1038
|
4.3
|
179.1
|
1.0
|
|
O
|
D:ALA1043
|
4.3
|
182.2
|
1.0
|
|
OD2
|
D:ASP1046
|
4.4
|
181.0
|
1.0
|
|
OD2
|
D:ASP915
|
4.4
|
180.5
|
1.0
|
|
CB
|
D:ASP1046
|
4.5
|
181.0
|
1.0
|
|
CA
|
D:ALA1043
|
4.5
|
182.2
|
1.0
|
|
C
|
D:ALA1043
|
4.6
|
182.2
|
1.0
|
|
CB
|
D:ASP915
|
4.6
|
180.5
|
1.0
|
|
N
|
D:ASN1038
|
4.6
|
179.1
|
1.0
|
|
CB
|
D:ASP1040
|
4.7
|
183.1
|
1.0
|
|
N
|
D:ALA1043
|
4.7
|
182.2
|
1.0
|
|
N
|
D:ASP1040
|
4.7
|
183.1
|
1.0
|
|
CA
|
D:ASN1038
|
4.9
|
179.1
|
1.0
|
|
O
|
D:ASP1040
|
4.9
|
183.1
|
1.0
|
|
N
|
D:PHE1039
|
5.0
|
182.3
|
1.0
|
|
Reference:
S.Trillo-Muyo,
G.C.Hansson.
Structure of the D3 Domain of MUC5AC Suggest the Formation of Net-Like Mucin Polymers To Be Published.
Page generated: Tue Feb 25 08:39:11 2025
|
