Calcium in PDB 8r1u: MUC5AC D3 Assembly. Snp RS878913005: ARG1201TRP.

The binding sites of Calcium atom in the MUC5AC D3 Assembly. Snp RS878913005: ARG1201TRP. (pdb code 8r1u). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the MUC5AC D3 Assembly. Snp RS878913005: ARG1201TRP., PDB code: 8r1u:
Jump to Calcium binding site number: 1; 2;

Calcium binding site 1 out of 2 in the MUC5AC D3 Assembly. Snp RS878913005: ARG1201TRP.


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of MUC5AC D3 Assembly. Snp RS878913005: ARG1201TRP. within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca1401 b:216.3 occ:1.00 OD1 A:ASN1045 2.3 202.9 1.0 OD1 A:ASP1046 2.3 202.5 1.0 OD1 A:ASP1040 2.3 169.8 1.0 O A:ILE1042 2.4 189.1 1.0 OD1 A:ASN1038 2.8 183.5 1.0 N A:ASP1046 2.9 202.7 1.0 CG A:ASP1046 3.0 202.6 1.0 OD2 A:ASP915 3.0 179.4 1.0 CA A:ASP1046 3.1 202.7 1.0 C A:ASN1045 3.1 203.0 1.0 CG A:ASP1040 3.2 170.0 1.0 CG A:ASN1045 3.3 202.9 1.0 OD2 A:ASP1040 3.4 170.4 1.0 CB A:ASP1046 3.4 202.6 1.0 CG A:ASN1038 3.5 183.2 1.0 O A:ASN1045 3.5 202.8 1.0 O A:ASN1038 3.5 182.8 1.0 ND2 A:ASN1038 3.6 183.1 1.0 C A:ILE1042 3.6 188.9 1.0 CA A:ASN1045 3.9 203.2 1.0 N A:ASN1045 3.9 203.2 1.0 OD2 A:ASP1046 4.0 202.6 1.0 CB A:ASN1045 4.0 203.0 1.0 ND2 A:ASN1045 4.2 203.0 1.0 CG A:ASP915 4.3 179.3 1.0 CA A:ILE1042 4.4 188.5 1.0 N A:ILE1042 4.4 188.2 1.0 CB A:ILE1042 4.4 188.6 1.0 C A:ASP1046 4.6 202.8 1.0 CB A:ASP1040 4.6 169.8 1.0 C A:ASN1038 4.6 182.8 1.0 N A:ALA1043 4.7 205.0 1.0 CB A:ASN1038 4.8 182.9 1.0 N A:ASN1038 4.8 183.0 1.0 CA A:ALA1043 4.9 205.3 1.0 N A:ASP1040 4.9 169.8 1.0 CG2 A:ILE1042 4.9 188.6 1.0 N A:VAL1044 4.9 206.4 1.0 CA A:ASN1038 5.0 182.9 1.0

Calcium binding site 2 out of 2 in the MUC5AC D3 Assembly. Snp RS878913005: ARG1201TRP.


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of MUC5AC D3 Assembly. Snp RS878913005: ARG1201TRP. within 5.0Å range: probe atom residue distance (Å) B Occ B:Ca1401 b:216.3 occ:1.00 OD1 B:ASN1045 2.3 202.9 1.0 OD1 B:ASP1046 2.3 202.5 1.0 OD1 B:ASP1040 2.3 169.8 1.0 O B:ILE1042 2.5 189.1 1.0 OD1 B:ASN1038 2.8 183.5 1.0 N B:ASP1046 2.9 202.7 1.0 CG B:ASP1046 3.0 202.6 1.0 OD2 B:ASP915 3.1 179.4 1.0 CA B:ASP1046 3.1 202.7 1.0 C B:ASN1045 3.1 203.0 1.0 CG B:ASP1040 3.2 170.0 1.0 CG B:ASN1045 3.3 202.9 1.0 OD2 B:ASP1040 3.4 170.4 1.0 CB B:ASP1046 3.4 202.6 1.0 CG B:ASN1038 3.4 183.2 1.0 O B:ASN1045 3.5 202.8 1.0 O B:ASN1038 3.5 182.8 1.0 ND2 B:ASN1038 3.6 183.1 1.0 C B:ILE1042 3.6 188.9 1.0 CA B:ASN1045 3.9 203.2 1.0 N B:ASN1045 3.9 203.2 1.0 OD2 B:ASP1046 4.0 202.6 1.0 CB B:ASN1045 4.0 203.0 1.0 ND2 B:ASN1045 4.2 203.0 1.0 CG B:ASP915 4.3 179.3 1.0 CA B:ILE1042 4.4 188.5 1.0 N B:ILE1042 4.4 188.2 1.0 CB B:ILE1042 4.4 188.6 1.0 C B:ASP1046 4.6 202.8 1.0 CB B:ASP1040 4.6 169.8 1.0 C B:ASN1038 4.6 182.8 1.0 N B:ALA1043 4.7 205.0 1.0 CB B:ASN1038 4.7 182.9 1.0 N B:ASN1038 4.8 183.0 1.0 CA B:ALA1043 4.9 205.3 1.0 N B:ASP1040 4.9 169.8 1.0 CG2 B:ILE1042 4.9 188.6 1.0 N B:VAL1044 5.0 206.4 1.0 CA B:ASN1038 5.0 182.9 1.0

S.Trillo-Muyo, A.Ermund, G.C.Hansson. Structure of the MUC5AC VWD3 Assembly Responsible For the Formation of Net-Like Mucin Polymers. Embo Rep. 2025.
ISSN: ESSN 1469-3178
PubMed: 40016425
DOI: 10.1038/S44319-025-00395-8