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Calcium in PDB 8r9t: Crystal Structure of the C-Terminal Domain of Chlamydomonas Reinhardtii CFAP410

Protein crystallography data

The structure of Crystal Structure of the C-Terminal Domain of Chlamydomonas Reinhardtii CFAP410, PDB code: 8r9t was solved by A.Stadler, G.Dong, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.79 / 1.40
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 43.435, 48.097, 53.156, 90, 90, 90
R / Rfree (%) 16.3 / 18.9

Calcium Binding Sites:

The binding sites of Calcium atom in the Crystal Structure of the C-Terminal Domain of Chlamydomonas Reinhardtii CFAP410 (pdb code 8r9t). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Crystal Structure of the C-Terminal Domain of Chlamydomonas Reinhardtii CFAP410, PDB code: 8r9t:

Calcium binding site 1 out of 1 in 8r9t

Go back to Calcium Binding Sites List in 8r9t
Calcium binding site 1 out of 1 in the Crystal Structure of the C-Terminal Domain of Chlamydomonas Reinhardtii CFAP410


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of the C-Terminal Domain of Chlamydomonas Reinhardtii CFAP410 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca301

b:21.2
occ:1.00
OE1 A:GLN241 2.3 23.5 1.0
O A:HOH422 2.4 25.8 1.0
OE2 A:GLU238 2.4 21.2 1.0
OE1 A:GLU238 2.5 22.5 1.0
CD A:GLU238 2.8 20.9 1.0
HE22 A:GLN241 3.3 33.0 1.0
CD A:GLN241 3.4 23.3 1.0
NE2 A:GLN241 3.7 27.5 1.0
CG A:GLU238 4.3 20.2 1.0
HA A:GLU238 4.4 22.9 1.0
HE21 A:GLN241 4.6 33.0 1.0
O A:HOH409 4.6 22.6 1.0
HG3 A:GLU238 4.7 24.2 1.0
HG2 A:GLU238 4.7 24.2 1.0
CG A:GLN241 4.7 23.6 1.0
HB2 A:GLN241 4.8 28.1 1.0
O A:HOH424 4.8 45.0 1.0
HB3 A:GLN241 4.9 28.1 1.0
HG3 A:GLN241 5.0 28.4 1.0

Reference:

A.Stadler, L.V.De Liz, H.B.Gabriel, S.Alonso-Gil, R.Crickley, K.Korbula, B.Zagrovic, S.Vaughan, J.D.Sunter, G.Dong. The C-Terminus of CFAP410 Forms A Tetrameric Helical Bundle That Is Essential For Its Localization to the Basal Body. Open Biology V. 14 40128 2024.
ISSN: ESSN 2046-2441
PubMed: 39255848
DOI: 10.1098/RSOB.240128
Page generated: Thu Jul 10 06:51:00 2025

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