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Calcium in PDB 8sdk: The Microed Structure of Proteinase K Crystallized By Suspended Drop Crystallization

Enzymatic activity of The Microed Structure of Proteinase K Crystallized By Suspended Drop Crystallization

All present enzymatic activity of The Microed Structure of Proteinase K Crystallized By Suspended Drop Crystallization:
3.4.21.64;

Calcium Binding Sites:

The binding sites of Calcium atom in the The Microed Structure of Proteinase K Crystallized By Suspended Drop Crystallization (pdb code 8sdk). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the The Microed Structure of Proteinase K Crystallized By Suspended Drop Crystallization, PDB code: 8sdk:

Calcium binding site 1 out of 1 in 8sdk

Go back to Calcium Binding Sites List in 8sdk
Calcium binding site 1 out of 1 in the The Microed Structure of Proteinase K Crystallized By Suspended Drop Crystallization


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of The Microed Structure of Proteinase K Crystallized By Suspended Drop Crystallization within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca402

b:35.7
occ:1.00
OD2 A:ASP305 2.4 31.1 1.0
O A:HOH530 2.4 15.8 1.0
O A:PRO280 2.5 14.2 1.0
O A:HOH512 2.5 13.6 1.0
O A:VAL282 2.8 19.5 1.0
CG A:ASP305 3.2 29.9 1.0
OD1 A:ASP305 3.3 39.6 1.0
C A:PRO280 3.4 12.6 1.0
CA A:PRO280 3.9 13.9 1.0
C A:VAL282 4.0 18.6 1.0
O A:VAL303 4.2 16.4 1.0
O A:GLU279 4.4 14.6 1.0
N A:VAL282 4.4 13.3 1.0
N A:SER281 4.4 12.3 1.0
C A:SER281 4.6 14.9 1.0
CB A:ASP305 4.6 19.2 1.0
CB A:PRO280 4.8 12.3 1.0
CA A:SER281 4.8 16.9 1.0
CA A:VAL282 4.9 13.6 1.0
N A:CYS283 4.9 17.9 1.0
CA A:CYS283 4.9 16.8 1.0

Reference:

C.Gillman, W.J.Nicolas, W.M.Martynowycz, T.Gonen. Design and Implementation of Suspended Drop Crystallization To Be Published.
Page generated: Thu Jul 10 07:01:45 2025

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