Calcium in PDB 8vgx: Phosphate-Bound Vanadium-Dependent Bromoperoxidase From Corallina Pilulifera

All present enzymatic activity of Phosphate-Bound Vanadium-Dependent Bromoperoxidase From Corallina Pilulifera:
1.11.1.18;

The binding sites of Calcium atom in the Phosphate-Bound Vanadium-Dependent Bromoperoxidase From Corallina Pilulifera (pdb code 8vgx). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the Phosphate-Bound Vanadium-Dependent Bromoperoxidase From Corallina Pilulifera, PDB code: 8vgx:
Jump to Calcium binding site number: 1; 2;

Calcium binding site 1 out of 2 in the Phosphate-Bound Vanadium-Dependent Bromoperoxidase From Corallina Pilulifera


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Phosphate-Bound Vanadium-Dependent Bromoperoxidase From Corallina Pilulifera within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca601 b:17.7 occ:1.00 OD2 A:ASP368 2.2 26.7 1.0 O A:PHE361 2.5 31.1 1.0 O A:GLN363 2.5 33.3 1.0 O A:GLN370 2.5 28.8 1.0 OD1 A:ASP368 2.8 42.3 1.0 CG A:ASP368 2.9 26.8 1.0 C A:PHE361 3.4 17.4 1.0 OD2 A:ASP365 3.5 40.2 1.0 C A:GLN363 3.6 23.9 1.0 C A:GLN370 3.6 22.7 1.0 CG A:ASP365 3.7 38.6 1.0 OD1 A:ASP365 3.9 44.1 1.0 N A:GLN363 4.0 23.2 1.0 N A:ASP365 4.1 35.9 1.0 C A:GLN362 4.1 22.6 1.0 CA A:PHE361 4.1 20.3 1.0 C A:GLU364 4.2 34.3 1.0 CA A:ASP365 4.2 30.1 1.0 N A:GLN362 4.3 18.3 1.0 CB A:PHE361 4.3 21.4 1.0 CB A:ASP368 4.4 22.9 1.0 CA A:GLN363 4.4 26.7 1.0 CA A:GLN362 4.4 17.0 1.0 N A:ASP371 4.4 26.7 1.0 O A:GLU364 4.4 39.2 1.0 N A:GLN370 4.5 20.2 1.0 CA A:ASP371 4.5 22.0 1.0 O A:GLN362 4.5 34.1 1.0 CB A:ASP365 4.6 31.7 1.0 CA A:GLN370 4.6 19.3 1.0 N A:GLU364 4.6 41.0 1.0 CA A:GLU364 4.7 33.6 1.0 OD1 A:ASP371 4.7 38.2 1.0

Calcium binding site 2 out of 2 in the Phosphate-Bound Vanadium-Dependent Bromoperoxidase From Corallina Pilulifera


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Phosphate-Bound Vanadium-Dependent Bromoperoxidase From Corallina Pilulifera within 5.0Å range: probe atom residue distance (Å) B Occ B:Ca601 b:15.6 occ:1.00 OD2 B:ASP368 2.3 36.2 1.0 O B:PHE361 2.3 28.8 1.0 O B:GLN370 2.4 27.4 1.0 OD1 B:ASP368 2.6 36.4 1.0 O B:GLN363 2.7 30.9 1.0 CG B:ASP368 2.8 22.1 1.0 C B:PHE361 3.2 20.0 1.0 C B:GLN370 3.6 20.8 1.0 C B:GLN363 3.7 25.8 1.0 N B:GLN363 3.8 22.1 1.0 OD2 B:ASP365 3.9 34.9 1.0 CA B:PHE361 3.9 22.8 1.0 C B:GLN362 4.0 22.5 1.0 N B:GLN362 4.0 20.1 1.0 CA B:GLN362 4.2 13.8 1.0 CB B:PHE361 4.2 19.1 1.0 CB B:ASP368 4.2 22.6 1.0 CG B:ASP365 4.2 42.7 1.0 CA B:GLN363 4.3 27.8 1.0 C B:GLU364 4.4 34.1 1.0 N B:GLN370 4.4 18.3 1.0 N B:ASP365 4.4 36.6 1.0 O B:GLU364 4.4 37.3 1.0 CA B:ASP365 4.5 29.7 1.0 CA B:GLN370 4.5 16.1 1.0 O B:GLN362 4.5 34.6 1.0 N B:ASP371 4.5 28.2 1.0 OD1 B:ASP365 4.6 46.7 1.0 CA B:ASP371 4.7 22.4 1.0 N B:GLU364 4.7 41.7 1.0 CA B:GLU364 4.9 33.4 1.0 CB B:GLN370 4.9 18.2 1.0 CB B:ASP365 4.9 33.9 1.0

L.Z.Hessefort, D.R.Williams, K.F.Biegasiewicz. High-Resolution Cryoem Unveils Insights Into the Catalytic Mechanism of A Vanadium-Dependent Bromoperoxidase To Be Published.