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Calcium in PDB 8zgo: Cryoem Structure of Monomeric Quinol Dependent Nitric Oxide Reductase From Neisseria Meningitidis

Enzymatic activity of Cryoem Structure of Monomeric Quinol Dependent Nitric Oxide Reductase From Neisseria Meningitidis

All present enzymatic activity of Cryoem Structure of Monomeric Quinol Dependent Nitric Oxide Reductase From Neisseria Meningitidis:
1.7.99.7;

Other elements in 8zgo:

The structure of Cryoem Structure of Monomeric Quinol Dependent Nitric Oxide Reductase From Neisseria Meningitidis also contains other interesting chemical elements:

Iron (Fe) 3 atoms

Calcium Binding Sites:

The binding sites of Calcium atom in the Cryoem Structure of Monomeric Quinol Dependent Nitric Oxide Reductase From Neisseria Meningitidis (pdb code 8zgo). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Cryoem Structure of Monomeric Quinol Dependent Nitric Oxide Reductase From Neisseria Meningitidis, PDB code: 8zgo:

Calcium binding site 1 out of 1 in 8zgo

Go back to Calcium Binding Sites List in 8zgo
Calcium binding site 1 out of 1 in the Cryoem Structure of Monomeric Quinol Dependent Nitric Oxide Reductase From Neisseria Meningitidis


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Cryoem Structure of Monomeric Quinol Dependent Nitric Oxide Reductase From Neisseria Meningitidis within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca804

b:145.5
occ:1.00
O1D A:HEM801 2.5 68.7 1.0
OE1 A:GLU411 2.6 82.5 1.0
O A:GLY76 2.6 88.6 1.0
OE2 A:GLU411 2.8 79.2 1.0
O A:HOH921 2.9 30.0 1.0
O1A A:HEM802 2.9 93.9 1.0
CD A:GLU411 3.0 83.6 1.0
OH A:TYR78 3.1 80.2 1.0
CGD A:HEM801 3.5 73.8 1.0
O2A A:HEM802 3.6 85.6 1.0
C A:GLY76 3.6 83.0 1.0
CGA A:HEM802 3.6 87.2 1.0
CZ A:TYR78 3.6 77.2 1.0
O2D A:HEM801 3.7 85.5 1.0
NH2 A:ARG332 3.8 74.0 1.0
N A:GLY76 3.9 83.1 1.0
CE1 A:TYR78 4.0 82.2 1.0
O A:HOH908 4.1 30.0 1.0
CA A:GLY76 4.1 81.7 1.0
CE2 A:TYR78 4.3 73.1 1.0
OH A:TYR412 4.5 85.0 1.0
CG A:GLU411 4.5 67.9 1.0
N A:ALA77 4.6 61.7 1.0
NH1 A:ARG332 4.7 63.0 1.0
CZ A:ARG332 4.7 64.7 1.0
CBD A:HEM801 4.7 62.1 1.0
CE2 A:TYR412 4.9 67.7 1.0
CBA A:HEM802 4.9 79.9 1.0

Reference:

C.C.Gopalasingam, Y.Shiro, T.Tosha. Cryoem Structure of Monomeric Quinol Dependent Nitric Oxide Reductase From Neisseria Meningitidis To Be Published.
Page generated: Thu Jul 10 08:45:56 2025

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