Calcium in PDB 8zkh: Structure of Polycystin-1/Polycystin-2 Complex with Phosphatidylglycerol-Bound

The binding sites of Calcium atom in the Structure of Polycystin-1/Polycystin-2 Complex with Phosphatidylglycerol-Bound (pdb code 8zkh). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the Structure of Polycystin-1/Polycystin-2 Complex with Phosphatidylglycerol-Bound, PDB code: 8zkh:
Jump to Calcium binding site number: 1; 2;

Calcium binding site 1 out of 2 in the Structure of Polycystin-1/Polycystin-2 Complex with Phosphatidylglycerol-Bound


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Structure of Polycystin-1/Polycystin-2 Complex with Phosphatidylglycerol-Bound within 5.0Å range: probe atom residue distance (Å) B Occ B:Ca1001 b:97.5 occ:1.00 OD2 B:ASP511 3.1 73.8 1.0 OE1 B:GLU494 3.3 99.8 1.0 OE1 B:GLU491 3.3 91.7 1.0 OD1 B:ASN508 3.4 82.2 1.0 OE2 B:GLU491 3.8 91.7 1.0 CG B:ASP511 4.0 73.8 1.0 CD B:GLU491 4.0 91.7 1.0 CD B:GLU494 4.3 99.8 1.0 CB B:ASP511 4.5 73.8 1.0 CG B:ASN508 4.5 82.2 1.0 OE2 B:GLU494 4.6 99.8 1.0 CA B:ASN508 4.7 82.2 1.0 OD1 B:ASP511 4.8 73.8 1.0 OE2 B:GLU490 4.9 91.2 1.0 O B:TRP507 5.0 76.7 1.0

Calcium binding site 2 out of 2 in the Structure of Polycystin-1/Polycystin-2 Complex with Phosphatidylglycerol-Bound


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Structure of Polycystin-1/Polycystin-2 Complex with Phosphatidylglycerol-Bound within 5.0Å range: probe atom residue distance (Å) B Occ C:Ca1001 b:94.3 occ:1.00 ND2 C:ASN508 2.9 80.6 1.0 OE1 C:GLU491 2.9 93.8 1.0 OD1 C:ASP511 3.4 73.9 1.0 OE1 C:GLU494 3.7 100.0 1.0 CD C:GLU491 3.9 93.8 1.0 OE2 C:GLU491 4.1 93.8 1.0 CG C:ASN508 4.1 80.6 1.0 CG C:ASP511 4.1 73.9 1.0 CD C:GLU494 4.4 100.0 1.0 CA C:ASN508 4.4 80.6 1.0 CB C:ASP511 4.4 73.9 1.0 OE2 C:GLU494 4.5 100.0 1.0 CB C:ASN508 4.7 80.6 1.0 OE2 C:GLU490 4.7 90.8 1.0 N C:ASN508 5.0 80.6 1.0

M.Y.Chen, Q.Su, Y.G.Shi. Structure of Polycystin-1/Polycystin-2 Complex with Phosphatidylglycerol-Bound To Be Published.