Atomistry » Calcium » PDB 8znz-9awu » 9awc
Atomistry »
  Calcium »
    PDB 8znz-9awu »
      9awc »

Calcium in PDB 9awc: Crystal Structure of Trypsin at 175 Kelvin with Benzamidine (Duplicate)

Enzymatic activity of Crystal Structure of Trypsin at 175 Kelvin with Benzamidine (Duplicate)

All present enzymatic activity of Crystal Structure of Trypsin at 175 Kelvin with Benzamidine (Duplicate):
3.4.21.4;

Protein crystallography data

The structure of Crystal Structure of Trypsin at 175 Kelvin with Benzamidine (Duplicate), PDB code: 9awc was solved by L.M.T.R.Lima, F.De Sa Ribeiro, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 25.53 / 1.49
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 54.429, 58.291, 66.529, 90, 90, 90
R / Rfree (%) 19.7 / 22.5

Calcium Binding Sites:

The binding sites of Calcium atom in the Crystal Structure of Trypsin at 175 Kelvin with Benzamidine (Duplicate) (pdb code 9awc). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Crystal Structure of Trypsin at 175 Kelvin with Benzamidine (Duplicate), PDB code: 9awc:

Calcium binding site 1 out of 1 in 9awc

Go back to Calcium Binding Sites List in 9awc
Calcium binding site 1 out of 1 in the Crystal Structure of Trypsin at 175 Kelvin with Benzamidine (Duplicate)


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of Trypsin at 175 Kelvin with Benzamidine (Duplicate) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca301

b:9.9
occ:1.00
OE1 A:GLU52 2.2 10.9 1.0
O A:VAL57 2.2 10.8 1.0
O A:ASN54 2.3 8.9 1.0
OE2 A:GLU62 2.3 11.4 1.0
O A:HOH519 2.4 10.2 1.0
O A:HOH409 2.5 11.2 1.0
CD A:GLU52 3.3 10.0 1.0
C A:VAL57 3.3 10.8 1.0
CD A:GLU62 3.4 11.9 1.0
C A:ASN54 3.4 9.5 1.0
OE2 A:GLU52 3.7 10.3 1.0
CG A:GLU62 3.8 11.1 1.0
CA A:VAL58 4.1 12.5 1.0
N A:VAL58 4.1 11.1 1.0
OE1 A:GLU59 4.2 12.4 1.0
N A:VAL57 4.2 10.1 1.0
N A:GLU59 4.2 12.8 1.0
N A:ILE55 4.3 9.3 1.0
CA A:ILE55 4.3 9.0 1.0
CA A:VAL57 4.4 10.6 1.0
N A:ASN54 4.4 9.5 1.0
CA A:ASN54 4.4 10.0 1.0
CG A:GLU59 4.5 14.1 1.0
O A:HOH505 4.5 10.9 1.0
C A:ILE55 4.5 9.7 1.0
OE1 A:GLU62 4.5 11.6 1.0
N A:ASP53 4.6 9.9 1.0
CG A:GLU52 4.6 9.7 1.0
C A:VAL58 4.7 13.3 1.0
CA A:GLU52 4.7 10.1 1.0
CD A:GLU59 4.8 15.7 1.0
N A:ASN56 4.8 9.0 1.0
CB A:GLU52 4.8 9.6 1.0
CB A:GLU59 4.8 13.3 1.0
CB A:ASN54 4.9 9.1 1.0
O A:ILE55 4.9 12.0 1.0
O A:HOH638 4.9 15.8 1.0
C A:ASP53 5.0 10.1 1.0

Reference:

L.M.T.R.Lima, F.De Sa Ribeiro. Crystal Structure of Trypsin at 175 Kelvin with Benzamidine (Duplicate) To Be Published.
Page generated: Thu Jul 10 08:50:25 2025

Last articles

Cl in 6DT4
Cl in 6DUI
Cl in 6DTD
Cl in 6DU9
Cl in 6DTP
Cl in 6DTM
Cl in 6DT1
Cl in 6DS8
Cl in 6DS7
Cl in 6DS9
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy