Atomistry » Calcium » PDB 8zlw-9awo » 9awf
Atomistry »
  Calcium »
    PDB 8zlw-9awo »
      9awf »

Calcium in PDB 9awf: Crystal Structure of Trypsin at 200 Kelvin with Benzamidine

Enzymatic activity of Crystal Structure of Trypsin at 200 Kelvin with Benzamidine

All present enzymatic activity of Crystal Structure of Trypsin at 200 Kelvin with Benzamidine:
3.4.21.4;

Protein crystallography data

The structure of Crystal Structure of Trypsin at 200 Kelvin with Benzamidine, PDB code: 9awf was solved by L.M.T.R.Lima, F.De Sa Ribeiro, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 23.09 / 1.50
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 54.161, 58.579, 67.065, 90, 90, 90
R / Rfree (%) 15.6 / 18.5

Calcium Binding Sites:

The binding sites of Calcium atom in the Crystal Structure of Trypsin at 200 Kelvin with Benzamidine (pdb code 9awf). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Crystal Structure of Trypsin at 200 Kelvin with Benzamidine, PDB code: 9awf:

Calcium binding site 1 out of 1 in 9awf

Go back to Calcium Binding Sites List in 9awf
Calcium binding site 1 out of 1 in the Crystal Structure of Trypsin at 200 Kelvin with Benzamidine


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of Trypsin at 200 Kelvin with Benzamidine within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca301

b:8.0
occ:1.00
OE1 A:GLU52 2.2 9.0 1.0
O A:VAL57 2.3 9.3 1.0
O A:ASN54 2.3 8.8 1.0
OE2 A:GLU62 2.3 9.5 1.0
O A:HOH527 2.4 10.3 1.0
O A:HOH407 2.5 7.4 1.0
CD A:GLU52 3.3 7.9 1.0
C A:VAL57 3.4 9.4 1.0
CD A:GLU62 3.4 9.8 1.0
C A:ASN54 3.5 8.6 1.0
OE2 A:GLU52 3.8 8.8 1.0
CG A:GLU62 3.8 9.4 1.0
CA A:VAL58 4.1 10.6 1.0
N A:VAL58 4.1 8.8 1.0
N A:GLU59 4.2 10.0 1.0
N A:VAL57 4.2 8.6 1.0
OE1 A:GLU59 4.3 11.7 1.0
CA A:ILE55 4.3 9.1 1.0
N A:ILE55 4.3 8.5 1.0
N A:ASN54 4.4 8.2 1.0
CA A:ASN54 4.4 8.8 1.0
CA A:VAL57 4.4 9.5 1.0
CG A:GLU59 4.5 11.8 1.0
O A:HOH487 4.5 9.3 1.0
C A:ILE55 4.5 8.2 1.0
N A:ASP53 4.5 7.5 1.0
OE1 A:GLU62 4.5 10.4 1.0
CG A:GLU52 4.6 8.4 1.0
C A:VAL58 4.6 10.8 1.0
CA A:GLU52 4.7 7.6 1.0
CB A:ASN54 4.8 8.8 1.0
CB A:GLU59 4.8 10.4 1.0
CB A:GLU52 4.8 8.1 1.0
CD A:GLU59 4.8 12.8 1.0
O A:HOH611 4.8 23.6 1.0
N A:ASN56 4.9 7.9 1.0
O A:ILE55 4.9 8.7 1.0
C A:ASP53 5.0 8.5 1.0

Reference:

L.M.T.R.Lima, F.De Sa Ribeiro. Crystal Structure of Trypsin at 200 Kelvin with Benzamidine To Be Published.
Page generated: Thu Jul 10 08:50:35 2025

Last articles

Mg in 8CGI
Mg in 8CF8
Mg in 8CGA
Mg in 8CEP
Mg in 8CF1
Mg in 8CAH
Mg in 8CE5
Mg in 8CDQ
Mg in 8CE2
Mg in 8CCO
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy