Atomistry » Calcium » PDB 8znz-9awu » 9awg
Atomistry »
  Calcium »
    PDB 8znz-9awu »
      9awg »

Calcium in PDB 9awg: Crystal Structure of Trypsin at 200 Kelvin with Benzamidine (Duplicate)

Enzymatic activity of Crystal Structure of Trypsin at 200 Kelvin with Benzamidine (Duplicate)

All present enzymatic activity of Crystal Structure of Trypsin at 200 Kelvin with Benzamidine (Duplicate):
3.4.21.4;

Protein crystallography data

The structure of Crystal Structure of Trypsin at 200 Kelvin with Benzamidine (Duplicate), PDB code: 9awg was solved by L.M.T.R.Lima, F.De Sa Ribeiro, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 24.26 / 1.49
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 53.611, 56.852, 66.117, 90, 90, 90
R / Rfree (%) 22.2 / 25

Calcium Binding Sites:

The binding sites of Calcium atom in the Crystal Structure of Trypsin at 200 Kelvin with Benzamidine (Duplicate) (pdb code 9awg). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Crystal Structure of Trypsin at 200 Kelvin with Benzamidine (Duplicate), PDB code: 9awg:

Calcium binding site 1 out of 1 in 9awg

Go back to Calcium Binding Sites List in 9awg
Calcium binding site 1 out of 1 in the Crystal Structure of Trypsin at 200 Kelvin with Benzamidine (Duplicate)


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of Trypsin at 200 Kelvin with Benzamidine (Duplicate) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca301

b:11.1
occ:1.00
OE1 A:GLU52 2.2 10.7 1.0
O A:VAL57 2.3 8.2 1.0
O A:ASN54 2.3 12.3 1.0
OE2 A:GLU62 2.3 12.7 1.0
O A:HOH418 2.4 13.0 1.0
CD A:GLU52 3.3 11.5 1.0
CD A:GLU62 3.4 12.0 1.0
C A:VAL57 3.4 11.3 1.0
C A:ASN54 3.4 12.2 1.0
OE2 A:GLU52 3.7 10.2 1.0
CG A:GLU62 3.8 12.8 1.0
CA A:VAL58 4.1 12.5 1.0
N A:VAL58 4.1 12.2 1.0
N A:GLU59 4.2 13.2 1.0
CA A:ILE55 4.2 12.8 1.0
N A:VAL57 4.3 10.5 1.0
OE1 A:GLU59 4.3 13.8 1.0
N A:ILE55 4.3 12.1 1.0
N A:ASN54 4.3 11.6 1.0
CA A:ASN54 4.4 11.5 1.0
CA A:VAL57 4.4 11.2 1.0
C A:ILE55 4.5 11.5 1.0
O A:HOH445 4.5 12.4 1.0
OE1 A:GLU62 4.5 10.4 1.0
CG A:GLU59 4.5 13.7 1.0
N A:ASP53 4.5 10.4 1.0
CG A:GLU52 4.6 10.7 1.0
C A:VAL58 4.6 13.7 1.0
CA A:GLU52 4.7 9.3 1.0
CB A:ASN54 4.8 10.4 1.0
O A:ILE55 4.8 10.4 1.0
CD A:GLU59 4.8 16.6 1.0
O A:HOH548 4.8 24.3 1.0
CB A:GLU59 4.8 14.2 1.0
N A:ASN56 4.9 12.0 1.0
CB A:GLU52 4.9 10.0 1.0

Reference:

L.M.T.R.Lima, F.De Sa Ribeiro. Crystal Structure of Trypsin at 200 Kelvin with Benzamidine (Duplicate) To Be Published.
Page generated: Thu Jul 10 08:50:35 2025

Last articles

Cl in 6D31
Cl in 6D30
Cl in 6D2Z
Cl in 6D2V
Cl in 6D2S
Cl in 6D1V
Cl in 6D20
Cl in 6D1Z
Cl in 6D1Y
Cl in 6D1Q
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy