Atomistry » Calcium » PDB 9fli-9gqx » 9g6g
Atomistry »
  Calcium »
    PDB 9fli-9gqx »
      9g6g »

Calcium in PDB 9g6g: Semi-Active Psii Dimer From Native PEAK4 Psii Dimers

Enzymatic activity of Semi-Active Psii Dimer From Native PEAK4 Psii Dimers

All present enzymatic activity of Semi-Active Psii Dimer From Native PEAK4 Psii Dimers:
1.10.3.9;

Other elements in 9g6g:

The structure of Semi-Active Psii Dimer From Native PEAK4 Psii Dimers also contains other interesting chemical elements:

Magnesium (Mg) 70 atoms
Manganese (Mn) 4 atoms
Iron (Fe) 5 atoms
Chlorine (Cl) 3 atoms

Calcium Binding Sites:

The binding sites of Calcium atom in the Semi-Active Psii Dimer From Native PEAK4 Psii Dimers (pdb code 9g6g). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the Semi-Active Psii Dimer From Native PEAK4 Psii Dimers, PDB code: 9g6g:
Jump to Calcium binding site number: 1; 2;

Calcium binding site 1 out of 2 in 9g6g

Go back to Calcium Binding Sites List in 9g6g
Calcium binding site 1 out of 2 in the Semi-Active Psii Dimer From Native PEAK4 Psii Dimers


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Semi-Active Psii Dimer From Native PEAK4 Psii Dimers within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca414

b:31.7
occ:1.00
CA1 A:OEX414 0.0 31.7 1.0
O1 A:OEX414 2.3 38.8 1.0
O A:HOH564 2.4 28.8 1.0
O A:HOH509 2.4 29.4 1.0
OD2 A:ASP170 2.5 32.5 1.0
O2 A:OEX414 2.5 32.4 1.0
O5 A:OEX414 2.5 31.0 1.0
O A:ALA344 2.5 38.0 1.0
CG A:ASP170 3.3 28.8 1.0
MN2 A:OEX414 3.4 40.4 1.0
OE2 A:GLU189 3.4 35.3 1.0
MN3 A:OEX414 3.4 39.2 1.0
C A:ALA344 3.5 41.0 1.0
OE1 A:GLU189 3.5 32.5 1.0
MN1 A:OEX414 3.5 43.2 1.0
OD1 A:ASP170 3.6 31.5 1.0
MN4 A:OEX414 3.7 50.3 1.0
CD A:GLU189 3.8 31.9 1.0
O3 A:OEX414 3.9 33.2 1.0
O4 A:OEX414 4.0 35.8 1.0
OE1 A:GLN165 4.2 28.2 1.0
NH1 C:ARG345 4.4 26.0 1.0
CB A:ASP170 4.6 21.2 1.0
NH2 C:ARG345 4.6 25.3 1.0
OH A:TYR161 4.7 20.3 1.0
CA A:ALA344 4.8 39.8 1.0
O A:HOH521 4.9 24.9 1.0
CZ C:ARG345 4.9 23.3 1.0

Calcium binding site 2 out of 2 in 9g6g

Go back to Calcium Binding Sites List in 9g6g
Calcium binding site 2 out of 2 in the Semi-Active Psii Dimer From Native PEAK4 Psii Dimers


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Semi-Active Psii Dimer From Native PEAK4 Psii Dimers within 5.0Å range:
probe atom residue distance (Å) B Occ
O:Ca301

b:66.3
occ:1.00
O O:HOH415 2.2 57.8 1.0
OD1 O:ASN226 2.3 63.2 1.0
O O:THR164 2.4 64.0 1.0
O O:VAL227 2.4 54.3 1.0
CG O:ASN226 3.3 58.9 1.0
C O:THR164 3.6 62.9 1.0
C O:VAL227 3.6 49.8 1.0
ND2 O:ASN226 3.8 58.7 1.0
N O:VAL227 4.3 48.3 1.0
CA O:SER165 4.4 63.8 1.0
CA O:ALA228 4.4 49.3 1.0
N O:SER165 4.4 62.0 1.0
N O:ALA228 4.4 49.7 1.0
CA O:THR164 4.5 61.2 1.0
C O:ASN226 4.5 46.5 1.0
CA O:VAL227 4.5 47.9 1.0
CB O:ASN226 4.6 50.4 1.0
OD1 O:ASP167 4.7 64.2 1.0
CB O:THR164 4.8 60.8 1.0
O O:ASN226 4.9 47.9 1.0
CA O:ASN226 4.9 45.6 1.0
O O:THR166 4.9 59.4 1.0
C O:SER165 4.9 63.5 1.0
CB O:ALA228 4.9 44.5 1.0

Reference:

Z.Zhao, I.Vercellino, P.J.Nixon, L.A.Sazanov. Semi-Active Psii Dimer From the PEAK4 Psii Dimers To Be Published.
Page generated: Mon Aug 4 18:49:46 2025

Last articles

Fe in 3OZW
Fe in 3OR2
Fe in 3OZV
Fe in 3OZU
Fe in 3OX4
Fe in 3OWO
Fe in 3OV0
Fe in 3OW5
Fe in 3OVU
Fe in 3OVR
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy