Atomistry » Calcium » PDB 9l6y-9nb8 » 9mqv
Atomistry »
  Calcium »
    PDB 9l6y-9nb8 »
      9mqv »

Calcium in PDB 9mqv: Crystal Structure of Human 1122A11 Fab in Complex with Influenza Virus Neuraminidase From A/Singapore/Infimh-16-0019/2016 (H3N2)

Enzymatic activity of Crystal Structure of Human 1122A11 Fab in Complex with Influenza Virus Neuraminidase From A/Singapore/Infimh-16-0019/2016 (H3N2)

All present enzymatic activity of Crystal Structure of Human 1122A11 Fab in Complex with Influenza Virus Neuraminidase From A/Singapore/Infimh-16-0019/2016 (H3N2):
3.2.1.18;

Protein crystallography data

The structure of Crystal Structure of Human 1122A11 Fab in Complex with Influenza Virus Neuraminidase From A/Singapore/Infimh-16-0019/2016 (H3N2), PDB code: 9mqv was solved by X.Zhu, I.A.Wilson, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 38.63 / 2.20
Space group P 4
Cell size a, b, c (Å), α, β, γ (°) 115.9, 115.9, 76.775, 90, 90, 90
R / Rfree (%) 16.9 / 20.4

Calcium Binding Sites:

The binding sites of Calcium atom in the Crystal Structure of Human 1122A11 Fab in Complex with Influenza Virus Neuraminidase From A/Singapore/Infimh-16-0019/2016 (H3N2) (pdb code 9mqv). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Crystal Structure of Human 1122A11 Fab in Complex with Influenza Virus Neuraminidase From A/Singapore/Infimh-16-0019/2016 (H3N2), PDB code: 9mqv:

Calcium binding site 1 out of 1 in 9mqv

Go back to Calcium Binding Sites List in 9mqv
Calcium binding site 1 out of 1 in the Crystal Structure of Human 1122A11 Fab in Complex with Influenza Virus Neuraminidase From A/Singapore/Infimh-16-0019/2016 (H3N2)


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of Human 1122A11 Fab in Complex with Influenza Virus Neuraminidase From A/Singapore/Infimh-16-0019/2016 (H3N2) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca501

b:37.9
occ:1.00
 O A:ASP293 2.5 39.1 1.0
O A:GLY297 2.6 57.8 1.0
O A:HIS347 2.7 37.2 1.0
OD2 A:ASP324 2.7 35.9 1.0
O A:HOH632 2.7 39.0 1.0
CG A:ASP324 3.5 38.0 1.0
C A:ASP293 3.7 37.4 1.0
C A:GLY297 3.7 58.2 1.0
O A:HOH643 3.7 34.4 1.0
C A:HIS347 3.8 41.3 1.0
CA A:GLY348 3.9 31.9 1.0
CA A:SER298 4.1 36.1 1.0
CB A:ASP324 4.1 29.7 1.0
N A:SER298 4.3 37.5 1.0
N A:GLY348 4.3 36.9 1.0
OD1 A:ASP324 4.4 37.1 1.0
CA A:ASN294 4.4 43.0 1.0
O A:GLU344 4.4 46.7 1.0
N A:ASN294 4.5 34.0 1.0
CA A:ASP293 4.6 32.9 1.0
N A:ASP293 4.7 30.9 1.0
N A:GLY297 4.8 53.2 1.0
C A:ASN294 4.8 43.9 1.0
CA A:GLY297 4.8 54.5 1.0
CB A:ASP293 4.9 35.1 1.0
CB A:SER298 4.9 30.6 1.0
N A:HIS347 5.0 42.7 1.0

Reference:

X.Zhu, A.M.Khalil, M.S.Piepenbrink, W.Yu, Y.Ma, L.Martinez-Sobrido, I.A.Wilson, J.J.Kobie. Structure and Function of A Cross-Neutralizing Influenza Neuraminidase Antibody That Accommodates Recent N2 Na ASN245 Glycosylation. Biorxiv 2025.
ISSN: ISSN 2692-8205
PubMed: 40631320
DOI: 10.1101/2025.06.30.662356
Page generated: Mon Aug 4 18:58:42 2025

Last articles

Mg in 8CGI
Mg in 8CF8
Mg in 8CGA
Mg in 8CEP
Mg in 8CF1
Mg in 8CAH
Mg in 8CE5
Mg in 8CDQ
Mg in 8CE2
Mg in 8CCO
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy