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Calcium in PDB 2b33: Crystal Structure of A Putative Endoribonuclease (TM0215) From Thermotoga Maritima MSB8 at 2.30 A Resolution

Protein crystallography data

The structure of Crystal Structure of A Putative Endoribonuclease (TM0215) From Thermotoga Maritima MSB8 at 2.30 A Resolution, PDB code: 2b33 was solved by Joint Center For Structural Genomics (Jcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 26.64 / 2.30
Space group H 3
Cell size a, b, c (Å), α, β, γ (°) 53.280, 53.280, 228.410, 90.00, 90.00, 120.00
R / Rfree (%) 19.9 / 26.1

Calcium Binding Sites:

The binding sites of Calcium atom in the Crystal Structure of A Putative Endoribonuclease (TM0215) From Thermotoga Maritima MSB8 at 2.30 A Resolution (pdb code 2b33). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Crystal Structure of A Putative Endoribonuclease (TM0215) From Thermotoga Maritima MSB8 at 2.30 A Resolution, PDB code: 2b33:

Calcium binding site 1 out of 1 in 2b33

Go back to Calcium Binding Sites List in 2b33
Calcium binding site 1 out of 1 in the Crystal Structure of A Putative Endoribonuclease (TM0215) From Thermotoga Maritima MSB8 at 2.30 A Resolution


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of A Putative Endoribonuclease (TM0215) From Thermotoga Maritima MSB8 at 2.30 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Ca129

b:33.0
occ:1.00
OE1 B:GLU38 2.3 19.4 1.0
OD2 B:ASP36 2.3 46.4 1.0
OD1 B:ASP36 2.9 43.1 1.0
CG B:ASP36 3.0 39.7 1.0
O B:HOH140 3.2 34.8 1.0
CD B:GLU38 3.5 29.9 1.0
CB B:GLU38 4.2 34.5 1.0
CG B:GLU38 4.3 32.4 1.0
OE2 B:GLU38 4.4 23.6 1.0
NH1 B:ARG53 4.4 39.9 1.0
CB B:ASP36 4.4 36.9 1.0
N B:GLU38 4.6 34.2 1.0
CD B:PRO37 4.7 33.5 1.0

Reference:

Joint Center For Structural Genomics (Jcsg), Joint Center For Structural Genomics (Jcsg). N/A N/A.
Page generated: Fri Jul 12 08:55:58 2024

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